| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1550 |
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| Symbol | |
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| ID | 4600843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1498573 |
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| End bp | 1499859 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774324 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_920949 |
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| Protein GI | 119720454 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGA AAAAGGTACT GGTAGCAGCG GTAGTAGCAC TAGTTGTCCT GGTAGCCCTC
GCCGCCTACG TTCTCTACCG GCCGAAGCCG AAGTCTGTCA CCCTAACGTT CGTCTCGACG
CAGCTCAGCC CTCCCACCGA GCAAGCTTTC ATGAGGTCTC TACTATCCCG GTTCGGGAAC
GAGACGGGCA TAAAGGTCGA CTTCGTGCCG CTAGGCTACA CCGACATGGT GGCGAAGGTA
GAAGCAGAGG TCAACTCCGG GAAGGTCTCG ACCAACATAA TCGGAGGTCT CTCCTCGGAG
GTGGACTACT TCGCCAGCAA GGGGCTTGTA GAGGATCTTT CTAAGTTCGG CTCCCTACCC
GGCAGGACGT TCTACCCAGC GCTCGAGCAG GCCTCGAAGA TGTACGGCAT TAAGGCCATG
GTTCCCTGGA TGACCGCGAC CTTCGTTATC GTGGTGAACA ACAAGGCCTT CGACTACCTG
CCGCCGGGCC TTACGAAGGA CGACGTGATA AAGGGAACCG ACAAGTGGAC GTACGACGCG
CTCCTAGCGT GGGCCAAGAA CATCTACGAG AAGACCGGGA AGCAGGCAGT AGGGTTACCG
GCGGGGGGCG GAGGGCTCCT CCATAGGTTC CTCCACGGCT ACCTCTACCC GTCCTACACG
GGGTACCAGG CGAAGGCGTT CAACTCCCCG GAGGCCGTGG AGCTTTGGAA GTACCTGAGG
GAGCTCTGGA AGTACACGAA CCCTGCCAGC ACGACGTACG ACGCAATGGC GGACCCCTTG
CTCAAAGGTG ACGTCTGGAT CGCGTGGGAC CACGTCGCCC GGGTGAAAGC CGCTATAACG
ACCTCGCCCG ACCAGTTCAC GGTGTGCCCC GTGCCGCGGG GACCCAAAGG GAGAGGCTAC
ATAGTGGTTC TAGCAGGGCT CGCTATACCC AAGGGAGCCC CCGACCAGGA CTCGGCGTGG
AAGCTCGTAG AGTTCCTGAC GAGGCCAGAG GTTCAGGCCA AGGTGGCCGA GAACGTAGGC
TTCTTCCCGA CAGTTAAGGA GGCAAGCCCG GCGATAACGG GTCCCATAAA GAAGCTGGCT
GACGGTGTGT CCGCTCAGAT GGCGGCCCCA GACTCCATAG CGGTTATGAT ACCGCCGCTC
GGCGCCAAGG CTGGAAGCTT CAACTCCGTG TACCGCGATG CCTTCACGAG GATCGTGCTC
AAAGGAGAGG ACATCCAGGC GGTTCTAGCC GACGACGCCG GAAAGCTTGA CAGCATATTC
AAGGAGCTGA AGATACCGCC TCCCTAA
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| Protein sequence | MPQKKVLVAA VVALVVLVAL AAYVLYRPKP KSVTLTFVST QLSPPTEQAF MRSLLSRFGN
ETGIKVDFVP LGYTDMVAKV EAEVNSGKVS TNIIGGLSSE VDYFASKGLV EDLSKFGSLP
GRTFYPALEQ ASKMYGIKAM VPWMTATFVI VVNNKAFDYL PPGLTKDDVI KGTDKWTYDA
LLAWAKNIYE KTGKQAVGLP AGGGGLLHRF LHGYLYPSYT GYQAKAFNSP EAVELWKYLR
ELWKYTNPAS TTYDAMADPL LKGDVWIAWD HVARVKAAIT TSPDQFTVCP VPRGPKGRGY
IVVLAGLAIP KGAPDQDSAW KLVEFLTRPE VQAKVAENVG FFPTVKEASP AITGPIKKLA
DGVSAQMAAP DSIAVMIPPL GAKAGSFNSV YRDAFTRIVL KGEDIQAVLA DDAGKLDSIF
KELKIPPP
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