Gene Tpen_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1542 
Symbol 
ID4600835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1490705 
End bp1491658 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content56% 
IMG OID639774316 
ProductpaREP7 
Protein accessionYP_920941 
Protein GI119720446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.380993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCGC TGGGTAGGAG GGAGTGGGAG AGGCTTATCA AGGCTTTGGA GGAGGATAGG 
GAGCTTAGGT ACGCGTTAGC CGGTTTGCTG GGCTTCAGGG ATTTGCTCGA GAAGATGGAC
GCGACGCTGA GCGAGATAAA GGCTTTGAGG GAGGGACAGG AGCAACTGTG GAGAAAACAG
GAGAAGCTGT GGGGAGAGGT GAGAAAGCTC TGGGAGGAAG TCAGAGCGCT GAGAGAGGAT
CAAAGAAAGC TGTGGGAAGA GGTAAAAGCT CTGAGGGAAA ACCAGGAAAA GCTATGGGAG
GAAGTGAAGT CCCTCAGAGA GGGGCAGGGA AAGCTATGGG AAGAAGTTAA GGCGCTGAGA
GAGGATCAGA GGAGGCTGTG GGAGGAGGTG AAGGCTCTCA GGGAAAACCA GGAAAAATTA
TGGGAGGAAG TTAGAGCTTT AAGAGAGGAC CAGGGGAAGC TGTGGGAAGG CCAGCAGAGG
CTCTGGGAGG AGGTCAGGGC GCTGAGAGAA GGGCAGGAGA GGTTGCGTGG AGATGTGGAT
GGGCTACGCG CCAGTTTTAG GCAACTAGGC GAAGCTGTTG GCATGACACT CGAGTTCTAC
GCCGCCGCTT TCCTGGAGAG ACTCCTGGCG GAGAAGGGGT ACCCGGAGGC TAGGGTCAGG
GTTGGCGTCA ACCTAGCGTA CAAAGGCGTA CTAGTAGAGC TCGACCTCTT CTGCGAGGAG
CCGTTGCTAG TGGGGGAAGT GACTACCTAC CTGCGCTCCG CCGAGGATGC CGAGAGGGAG
GCGGCTAAGC TTATGGAGAG AGTTAAGGTA GTCGAGGAGA TCAGCGGGAG AAAAGTGGAG
CTAGCAGTGC TGGCTGTAGC GAACCTCGGC AGAGAAGCCC TAGAGGTCCT GGAGAAGCTA
CATAGAGAGA AAGGAGTACT GGTCGTAACC GGTAGAGAAC TAGAGTACCC CTAA
 
Protein sequence
MAALGRREWE RLIKALEEDR ELRYALAGLL GFRDLLEKMD ATLSEIKALR EGQEQLWRKQ 
EKLWGEVRKL WEEVRALRED QRKLWEEVKA LRENQEKLWE EVKSLREGQG KLWEEVKALR
EDQRRLWEEV KALRENQEKL WEEVRALRED QGKLWEGQQR LWEEVRALRE GQERLRGDVD
GLRASFRQLG EAVGMTLEFY AAAFLERLLA EKGYPEARVR VGVNLAYKGV LVELDLFCEE
PLLVGEVTTY LRSAEDAERE AAKLMERVKV VEEISGRKVE LAVLAVANLG REALEVLEKL
HREKGVLVVT GRELEYP