| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1541 |
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| Symbol | |
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| ID | 4600834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1488979 |
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| End bp | 1490625 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639774315 |
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| Product | ABC transporter related |
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| Protein accession | YP_920940 |
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| Protein GI | 119720445 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.795149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTTCAG CCGTGGAGTT CCCGGTGGTC TTACGGGTGC CTGAAATAGA GGTCGAGGAG
CTTTCGTTTA CTTACGCCGG TAAAGGGGAG CCAGCGTTAA GGAACGTTAG CTTGGAAGTA
GACAAGGGCG AAGTGGTGCT TCTTGCCGGT AGGAGCGGGA GCGGGAAATC TACGCTTTTA
AAGGCCATCA ATGGGCTGAT ACCCCATAGG TACTCGGGAA CTTATAAGGG AGCCGTCAGG
GTAAGGGGGC TTACCGTAGC AGAAACTCCC GTCTACGAAT TGTCGAGAAT TGTAGGCACA
GTTATGCAGG AGGTCTCGAA GCAACTATTT CTGCCAACAG TAGCGGATGA CGTAGCGTTT
GGCCCCTCCA ACCTATGCAT CGAGAGAGAG GAAATTGAGA GGAGGGTTGA AGAGGCGCTG
AGTAGACTCG GCATACTGCA CCTGAAGGAT CGCGACGTGA ACGAGCTGAG TGGCGGCGAG
AAACAGAGAG TAGCCATAGC CGGCGTCTTA GCCATGAAGC CCGAAATAAT ACTCATGGAT
GAGCCTCTAG CCAATCTCGA TAGCGAAGGT GTAGCCACGG TTCAAGAGGT GATAAAGAGT
TTCCGCGAAG AGGGAAAAAC AGTCGTAATA GCGGAACACA GAGTTGAGGA AGTTCTGGAG
GTAGGGGTGG ACCGGGTCTT CGTGATGAGA GAGGGAACCA TAGTTAGGGA GGTGGAGAGA
GTAGAGGAGC TCGCCAACTT TGCGGATGAA CTGAAGGTTC CAGCAGAGGC TTACTTGCCC
CCGGGCATCG TGGAGGCTCC ACGCATCTCT CTGCCGCATC ACTCTCCGGG GGTAGTCGCC
GTAGAGTTTA GGAATGTGAG CTTTAGCTAC GAGGACAAGC CCGTACTCAA AGGGATAAAC
CTTGAGATAC GCGAGGGGGA GAGAGTCGCG CTTCTCGGAA ACAATGGCGC CGGTAAAAGC
ACAATGGCGA AGCTCATGCT CGGCTTGCTT AAACCTACGG AGGGTAGCGT CCTGGTCTAC
GGACGGGATA CCCACACGAT GGAAGTCTAT GAAGTCGCGC CGATGGTCGG GCTAGTGTTT
CAGGATCCTT TCAGCATGCT ATTCGCGGAG ACCGTGCGAG AAGAAATAGC ATTTGGGCCT
AGAAATCTGG GAGTTCCGCC CTCCGAGATA CCTGGGAGAG TGGAGGAGGC GGCGGAGAGG
TGCTTTGTGA AGCACTTGCT CGACTTCTCC CCCTTTGCGT CTAGCCATGG GGAGAAGAAG
AGAATATGCG TTGCCTCAAT ACTATCTATG AAGCCAAGGA TTCTGGTGCT GGACGAGCCT
ACAGCGGGGC AGGACTACGC TACATATACT GCTTTCATGG AGTTCGTAGA CTCCCTGGTA
AACGCCGGCG TCATTAAAAC ACTTGTACTA ATAACGCATG ACACCGATCT CGCAGTGGAA
TACACAGACA GAACAATAGT GCTTGCTAAC GGAGAGATAG TGGCAGACGG ACCAACTAGG
AAAGTGCTTT CAGACTCCTC TGTGCTTGCA AAGGGGAAGA TTCGTGAGAC AAGCCTTATT
AGGCTAGGCA AAAGGCTCAC CGGTGGAAAC TACATCTTGT CGAGAAAAGA ACTAGCTATG
CTAGCACGTA GCAGGACGCA TTCGTAG
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| Protein sequence | MRSAVEFPVV LRVPEIEVEE LSFTYAGKGE PALRNVSLEV DKGEVVLLAG RSGSGKSTLL
KAINGLIPHR YSGTYKGAVR VRGLTVAETP VYELSRIVGT VMQEVSKQLF LPTVADDVAF
GPSNLCIERE EIERRVEEAL SRLGILHLKD RDVNELSGGE KQRVAIAGVL AMKPEIILMD
EPLANLDSEG VATVQEVIKS FREEGKTVVI AEHRVEEVLE VGVDRVFVMR EGTIVREVER
VEELANFADE LKVPAEAYLP PGIVEAPRIS LPHHSPGVVA VEFRNVSFSY EDKPVLKGIN
LEIREGERVA LLGNNGAGKS TMAKLMLGLL KPTEGSVLVY GRDTHTMEVY EVAPMVGLVF
QDPFSMLFAE TVREEIAFGP RNLGVPPSEI PGRVEEAAER CFVKHLLDFS PFASSHGEKK
RICVASILSM KPRILVLDEP TAGQDYATYT AFMEFVDSLV NAGVIKTLVL ITHDTDLAVE
YTDRTIVLAN GEIVADGPTR KVLSDSSVLA KGKIRETSLI RLGKRLTGGN YILSRKELAM
LARSRTHS
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