Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1536 |
Symbol | |
ID | 4600378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1483986 |
End bp | 1484654 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639774310 |
Product | hypothetical protein |
Protein accession | YP_920935 |
Protein GI | 119720440 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGGAA CCCTGGTAAA CACGCTGACC GTGCTGGCAG GGTCCCTCGT CGGTTTGCTC CTCAGGAAGA GCGTGAACGC CGAGAGAGTA GCGTTTGTCG CCGACGTGCT TGGGCTTTTC ACAGTGGCGA TCGGGGTTCA AATGGCGCTC CAAGCGAGAA AGCCCGTGGC GATGATAGTC TCGTTGCTCC TCGGCTCCCT GGTGGGCGAA GCCCTCGGCG TGGAGGGAGC TCTTCAGAGG CTTTCGGAGA GAGTATCGAG GACGAGGTCC CAGGGCGTGG TCGACGGGAT GCTCACAGCC TTCCTGACGT TCTGCGTGGG GCCAATGACC GTAGTGGGGT CTATCAGGGA CGGCTTGGGA GACCCGAGCA TACTGCTGGC AAAGTCCGTC ATGGACGGCG TCGCATCGGT TGCCTACGCC GCGGCTATGG GTGTAGGCGT GGTGTTTAGC TCCGTCTTGG TGCTGGCCTT CCAGGGATCC CTGGCGTTGC TCGGAGCGCT GACGGGGGCG CTCCTGCCAG AGGCGTCGGT GAACGAGCTG ACCGCGGCAG GCGGAGTGCT CCTAATAGGC GTAGGCATCA ATTTGTTGAA GCTGAAGAGG ATCCGCGTGG GGAACATGCT CCCGGCGCTC CTGCTGGCAC CAATCCTGGC GCTGACGGGC ATGCCTTAA
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Protein sequence | MLGTLVNTLT VLAGSLVGLL LRKSVNAERV AFVADVLGLF TVAIGVQMAL QARKPVAMIV SLLLGSLVGE ALGVEGALQR LSERVSRTRS QGVVDGMLTA FLTFCVGPMT VVGSIRDGLG DPSILLAKSV MDGVASVAYA AAMGVGVVFS SVLVLAFQGS LALLGALTGA LLPEASVNEL TAAGGVLLIG VGINLLKLKR IRVGNMLPAL LLAPILALTG MP
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