| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1494 |
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| Symbol | |
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| ID | 4601403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1444122 |
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| End bp | 1446227 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639774269 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_920894 |
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| Protein GI | 119720399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.643815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGGAA GGGGCCCTGG GCTCTCGCTC GAGGAAAAGG CTAGCCTCGT CGTCGGCTGG
GGCTCTTCCA GGCGCCTACC GGGAGCCGCC GGGGAGACGC GGCCCGTCAG GGTACCGTCC
ATAGTGACTG CCGACGGCCC CTCTGGGCTC AGGGTTGAGC CTAGCGGGGG GCGCAGGTGG
TTTGCGACAG CCTTCCCGGT GCCGACAATG CTGGCTGCGA CGTGGAACCC CGAGGTCGTG
GAGAGGGTGG GCAGGGCTAT AGGAGAGGAG TGCAGGGCTT ACGGCGTGGA CGTGCTCTTG
GCTCCCGGGG TGAACATGCA CAGGCACCCG CTGTGCGGCA GGAACTTCGA GTACTTCAGC
GAAGACCCTC TTCTCAGCGG GGAGATGGCG GCCGCGTACG TTAGGGGCGT GCAGTCCGTG
GGCGTCGGTG CGACGTTGAA GCACTTCGCG GCTAACGACC AGGAGACTAA CAGGACGGTT
ATAGACACCG TGGTCTCCGA GAGGGCTCTC CGCGAGATCT ACCTCAAGCC CTTCGAGATA
GCGGTGAAGA AGGCTAAGCC GTGGTGCGTG ATGAGCTCCT ACAACAAGCT CAACGGGAAG
TACTCCTCCC AGAACGAGTG GCTCCTAACC AGGGTGCTCA GAGAGGAATG GGGGTTCGAC
GGGGTAGTGA TGACGGACTG GGGGGCCGGG GACGACTCGG TGGAGCAGGT CAACGCTGGG
AACGACCTGA TAATGCCCGG GAGCGACGAG GCCGTCGAGA AGCTCTTGGA GGCCGCTAGG
AGCGGCAGGC TGCGGCTAGA GGCTCTCGAA GCCTCCGCGG AGAGGGTTCT CAGGCTTGTG
AGGAAGTCGC TAACGTACAG GGGCTACAGG CCTAGAGGCG CGCCGGACCT AGATGGGCAC
GCTAGGGTAG CCTACGAGGC GGCATCCGAG GGGGTCGTGC TCCTCAAGAA CGAGGGAGCG
CTACCCCTGG GCCCCGGCGC CAGGGTGGCT TTATTCGGGA CGGGGCAGGT TGAGACGCTG
AAGGGCGGGA TGGGGAGTGG TCACACGCAC CCGAGGTACG TGGTCACGGT ACTGGAGGGG
TTGAAGAGCG GGGGGTTGCT GGTCGACGAG GAGCTCTCCT CGATCTACGA GCGCTACGTG
CGCGAAGCGA GGGGGGAGGA GTTCCTCGAG AAGCTCTACC TCGACGAGGT GTACGCGGAC
CCGCTACCCC AGGACATCGT CAGCGAGGGC GACGCGGCTA GGTTCGCCGA GAGGAACGAC
GCGGCGGTGG TCGTGCTCTA CAGGGTCTCC GGGGAGGGGT GGGACAGGCG CCCGGTTAGG
GGCGACTTCT ACCTCACGGA GAGCGAGGAA AGGTTGCTGA GGCTCGTATC GCGGGAGTTC
CGCGGGCGGG GTAAGAAGGT GGTAGTCGTG CTCAACGTGT GCGGCCCAAT CGAGGTTGCG
AGCTGGAGGG ACCTCGTCGA CGCGATCCTC GTAGTCTGGC TACCGGGGCA GGAGGCCGGC
AGGGTGGTAG CAGACGTGCT GGCAGGCAGA GTAAACCCGT CCGGGAAGCT CCCTATGACG
TGGCCGCGGG ACTGGACGGA CGTCCCGGCG GCGAAGGCGC CCGAGTGCTA CCCGGGGCTA
CCCGTGGAGG ATCCCCGCAG AGTCGTGTAC TGCGAGGGGG TCTACGTCGG CTACCGCTAC
TACGATACCT TCGGCGTGGA GCCAGCCTAC GAGTTCGGGT ACGGGCTCAG CTACACGAAG
TTCGAGTACA GGGGTCTCCG CGTCGCCTTG TCGCGCGGAG CCCTCAAGGT GTCCTTCGAA
GTCGTGAACG CTGGGAGCCG CCCGGGCAAG GAGGTAGCGC AGGTCTACGT GCGGGCCCCT
CGGGGCAGGA TCGACAAGCC GTTCCAAGAG CTGAAGGCAT TCAGGAAGAC GAGGCTACTG
GAACCCGGGG AGGCGGAGAG GATAAAGCTG AGGGTTAGCC TGAGGGACCT AGCCAGCTTC
GACGAGCGCG AGAAGGTATG GGTAGTCGAG CCGGGCGAGT ACGAAGTCAG AGTGGGCTCG
TCTTCGAGGG ACATCAGGCT TACTGAGCAC TTCGAGGTAA AGCAGGAGCT GAGATTCGCG
CCCTGA
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| Protein sequence | MRGRGPGLSL EEKASLVVGW GSSRRLPGAA GETRPVRVPS IVTADGPSGL RVEPSGGRRW
FATAFPVPTM LAATWNPEVV ERVGRAIGEE CRAYGVDVLL APGVNMHRHP LCGRNFEYFS
EDPLLSGEMA AAYVRGVQSV GVGATLKHFA ANDQETNRTV IDTVVSERAL REIYLKPFEI
AVKKAKPWCV MSSYNKLNGK YSSQNEWLLT RVLREEWGFD GVVMTDWGAG DDSVEQVNAG
NDLIMPGSDE AVEKLLEAAR SGRLRLEALE ASAERVLRLV RKSLTYRGYR PRGAPDLDGH
ARVAYEAASE GVVLLKNEGA LPLGPGARVA LFGTGQVETL KGGMGSGHTH PRYVVTVLEG
LKSGGLLVDE ELSSIYERYV REARGEEFLE KLYLDEVYAD PLPQDIVSEG DAARFAERND
AAVVVLYRVS GEGWDRRPVR GDFYLTESEE RLLRLVSREF RGRGKKVVVV LNVCGPIEVA
SWRDLVDAIL VVWLPGQEAG RVVADVLAGR VNPSGKLPMT WPRDWTDVPA AKAPECYPGL
PVEDPRRVVY CEGVYVGYRY YDTFGVEPAY EFGYGLSYTK FEYRGLRVAL SRGALKVSFE
VVNAGSRPGK EVAQVYVRAP RGRIDKPFQE LKAFRKTRLL EPGEAERIKL RVSLRDLASF
DEREKVWVVE PGEYEVRVGS SSRDIRLTEH FEVKQELRFA P
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