| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1452 |
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| Symbol | |
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| ID | 4601161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1402887 |
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| End bp | 1403789 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639774227 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920852 |
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| Protein GI | 119720357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00399019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG AGTCTCTTGC GGCTCTAACA CTGATACTAC CGGGTATGGC GGCGTTCCTC
TTCTTCAACG TCTACCCGAT CTTCTACTCG GTCTTCATAG CTTTTACCAA CGCGAAGCTC
GGGAACTTCC CCGTCCAGGC CCCCACCGCG GAGCCCCTAA GGATAGTGGG CTTGGAGAAC
TTCGTCTGGG CTCTGAGCGA CGAGAAGTTC AGGACAGCGT TCCTGTGGAC ATGGGTCTTC
GTAGCTACGA GCGTGACCCT GAAGGTTTTA ACCGGTATTT TCCTCAGCGT TCTGTACAAC
AGCAAGTACG TTAGGGGGAG GGCTATCTAC AGGTCCCTCT TGATAATCCC CTGGGCCCTG
CCGCTTCTCT TCACGATAAC GGTCTGGCGC TTCATGTTCG ACCCCGTCGT GGGGCCGGTT
AACGGCGTCC TGAGGGCTTT GGGAGTCGCA AACCCGCCTG ACTGGACTAC GGACATCACG
TGGGGCTTTA TAGCCCTCAA CATCATCGAG GTGTGGCTAG CGTACCCGTT CATGCTGACG
GTTATAACGG CCGCCCTGCA GTCGGTACCC TACACTCTGA TCGAGGCCGC TATAGTGGAC
GGCGCGAGCT ACTGGCAGAG GCTCACCAAG GTCATTATCC CCATAGTTAG CAAGCCGATA
ATCTTCGCGA CTATACTGAC CTCCGCGGCG AGCTTCCAGT ACTTCCTGGT ACCGTTCCTC
TTCAACGGGA GCCTGTTCGA GGACAGGTTC CTGCTGCTCT ACGGCTACAA GAAGGCTTTC
GGCTCGGCGG TTCCGGAGTA CGGCAAGGCG GCCGCTATCC TCGTGATAGT AACGCTCGTC
CTCGCGGTGT ACATGTTCGT GAACGTAAAG ATAACGAGGA TCCAGGAGGG TGCCAGGAAA
TGA
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| Protein sequence | MKKESLAALT LILPGMAAFL FFNVYPIFYS VFIAFTNAKL GNFPVQAPTA EPLRIVGLEN
FVWALSDEKF RTAFLWTWVF VATSVTLKVL TGIFLSVLYN SKYVRGRAIY RSLLIIPWAL
PLLFTITVWR FMFDPVVGPV NGVLRALGVA NPPDWTTDIT WGFIALNIIE VWLAYPFMLT
VITAALQSVP YTLIEAAIVD GASYWQRLTK VIIPIVSKPI IFATILTSAA SFQYFLVPFL
FNGSLFEDRF LLLYGYKKAF GSAVPEYGKA AAILVIVTLV LAVYMFVNVK ITRIQEGARK
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