Gene Tpen_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1387 
Symbol 
ID4600670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1341823 
End bp1342650 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID639774162 
Productalpha/beta hydrolase fold 
Protein accessionYP_920787 
Protein GI119720292 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.062595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG TGACAAGGGA GGTTAACCTT CCCAGCGGTC TCTCGACGGT TATGCGCGCA 
TGGCTCCCCG AGGGAGAGCC GAAGGCCGTG GTCGTCGGGA TACACGGGTT CGCGGAGCAC
TCCGGCAGGT ATGCACACGT CGGAGACTTC TTGTCGAGCC GCGGCTACGC GCTCTACATG
TACGACTTGA GGGGGCACGG GCTCTCCAAG TGGGAGAGGG GCTACGTCGA CTCCTTCGAC
CAGTTCGTCG AGGACAGCGT AGCCTTCTAC AGGCTGGTGG TCTCGGGGCA CGCTGGCAAG
AAGGGGTTCG TGCTGGGGCA CAGCATGGGC GGAGTAATCG CGGTGCTAAC GGTCTACAGG
CTTGGGGGAG AAGTGTCGGG GCTCGTCACC AGCGGGGCGG CGCTAGAAGT CAACGTGGGA
GCCGGCACGA GGCTCCTGCT CCGGCTCCTC TCAGCCGTCA ACCCGCGCGG GAGGGCGAAG
CTACCCGTAA ACGTGGACTG CCTCTCGAGG GACAAAGCGG TTGCGGAGAG CTACGTTGCC
GACAACCTTG TGTTCAAAGA CCCTACGTAC AGGTTGCTGG CAGAGTTCGG GAGAGGGGTC
TCCGAGGCTT GGAAAGCCGC CGCGAAGGTT ACCGTGCCGG CCCTGCTCAT GCACGGAGAG
GAGGATTGCC TCGTGCCTCC AAGTGCCTCC AGAAAGCTTT TCCAGGTACT GCCGTCCAGC
GATAAGACGC TGGAAGTCTT CCCGGGTATG AAGCACGAGA TTTTCAACGA GGTGGACAAG
GAAAAAGTCT TGGAAAAGCT CGCAGAGTGG CTAGACAAGC ACAGCTAA
 
Protein sequence
MSAVTREVNL PSGLSTVMRA WLPEGEPKAV VVGIHGFAEH SGRYAHVGDF LSSRGYALYM 
YDLRGHGLSK WERGYVDSFD QFVEDSVAFY RLVVSGHAGK KGFVLGHSMG GVIAVLTVYR
LGGEVSGLVT SGAALEVNVG AGTRLLLRLL SAVNPRGRAK LPVNVDCLSR DKAVAESYVA
DNLVFKDPTY RLLAEFGRGV SEAWKAAAKV TVPALLMHGE EDCLVPPSAS RKLFQVLPSS
DKTLEVFPGM KHEIFNEVDK EKVLEKLAEW LDKHS