Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1387 |
Symbol | |
ID | 4600670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1341823 |
End bp | 1342650 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639774162 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_920787 |
Protein GI | 119720292 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.062595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG TGACAAGGGA GGTTAACCTT CCCAGCGGTC TCTCGACGGT TATGCGCGCA TGGCTCCCCG AGGGAGAGCC GAAGGCCGTG GTCGTCGGGA TACACGGGTT CGCGGAGCAC TCCGGCAGGT ATGCACACGT CGGAGACTTC TTGTCGAGCC GCGGCTACGC GCTCTACATG TACGACTTGA GGGGGCACGG GCTCTCCAAG TGGGAGAGGG GCTACGTCGA CTCCTTCGAC CAGTTCGTCG AGGACAGCGT AGCCTTCTAC AGGCTGGTGG TCTCGGGGCA CGCTGGCAAG AAGGGGTTCG TGCTGGGGCA CAGCATGGGC GGAGTAATCG CGGTGCTAAC GGTCTACAGG CTTGGGGGAG AAGTGTCGGG GCTCGTCACC AGCGGGGCGG CGCTAGAAGT CAACGTGGGA GCCGGCACGA GGCTCCTGCT CCGGCTCCTC TCAGCCGTCA ACCCGCGCGG GAGGGCGAAG CTACCCGTAA ACGTGGACTG CCTCTCGAGG GACAAAGCGG TTGCGGAGAG CTACGTTGCC GACAACCTTG TGTTCAAAGA CCCTACGTAC AGGTTGCTGG CAGAGTTCGG GAGAGGGGTC TCCGAGGCTT GGAAAGCCGC CGCGAAGGTT ACCGTGCCGG CCCTGCTCAT GCACGGAGAG GAGGATTGCC TCGTGCCTCC AAGTGCCTCC AGAAAGCTTT TCCAGGTACT GCCGTCCAGC GATAAGACGC TGGAAGTCTT CCCGGGTATG AAGCACGAGA TTTTCAACGA GGTGGACAAG GAAAAAGTCT TGGAAAAGCT CGCAGAGTGG CTAGACAAGC ACAGCTAA
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Protein sequence | MSAVTREVNL PSGLSTVMRA WLPEGEPKAV VVGIHGFAEH SGRYAHVGDF LSSRGYALYM YDLRGHGLSK WERGYVDSFD QFVEDSVAFY RLVVSGHAGK KGFVLGHSMG GVIAVLTVYR LGGEVSGLVT SGAALEVNVG AGTRLLLRLL SAVNPRGRAK LPVNVDCLSR DKAVAESYVA DNLVFKDPTY RLLAEFGRGV SEAWKAAAKV TVPALLMHGE EDCLVPPSAS RKLFQVLPSS DKTLEVFPGM KHEIFNEVDK EKVLEKLAEW LDKHS
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