| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1249 |
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| Symbol | |
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| ID | 4600544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1184993 |
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| End bp | 1185955 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639774025 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_920650 |
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| Protein GI | 119720155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCCGAGC TGGTAGTGGT TAGGGACCTC AAGAAGTACT TCAAGGTTAG GGGTAGCTTC
TCCAAAACGG TCAAGGCCGT CGACGGGGTT TCCTTCGAGA TAAGGGAGGG CGAGACTCTC
GGGCTCGTTG GGGAGAGCGG GTGCGGCAAG TCCACGCTGG GGAGGGTCGT GATCAGGCTC
CTCGAGCCTA CCGGTGGGAA GGTTTTCTTC AAGGGGCAGG ACGTAGCCGC TCTGAAGGGC
GAGAAGCTGA AGCAGTTCAG GAGGCAGGCC CAGATAGTGT TCCAGGACCC CAACACATCG
CTGAACCCTA GGATGACCAT ACTGGAGATC CTGAGCGAGC CTCTCTACGA GCACAATATA
CCCGTCGACG ACCCCGAGGA CTTCATAACC AAGCAACTGG AAAGCGTGGG GCTGGGGCGG
GAGCACCTCT ACCGCTACCC CCACGAGCTC AGCGGTGGGC AGAAGCAAAG GGTAGCCATA
CTGAGGGCGC TCCTCCTCAA CCCGAGCTTC GTAGTGCTTG ACGAGCCGAC GTCGTCGCTC
GACGTCTCCG TCCAGGCACA GATACTCAAC ATGCTCAAGG ACTTCCAGGC GCAGAGGAAG
CTCTCCTACC TCTTCATCTC CCACGACATA GGCGTCGTGA AGTACATGAG CCAAAGGATA
GCCGTGATGT ACCTAGGCAA GATCGTCGAG CTAGGACCCT CGGACGCCGT CTTCGAGAAC
CCCCTCCACC CCTACACGAA GTTCCTGCTA AGCGCGGTCC CCGTGCCCGA CCCCAAGTAC
GCGAGGGCGA GGAAAAGGCT GGCAATACCG GGCGAGCCGC CATCGCCTAT AAACGTGCCG
CCCGGCTGCA GGTTCCACCC CAGGTGCCCC TACGCGACGG AGAAGTGCAG GACAGGCGAG
CCGCCCGTAG TCGAGGCAGA GCCCGGGCAC TTCGTCGCGT GCTGGCTGTA CAGCAAGGGC
TAG
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| Protein sequence | MSELVVVRDL KKYFKVRGSF SKTVKAVDGV SFEIREGETL GLVGESGCGK STLGRVVIRL
LEPTGGKVFF KGQDVAALKG EKLKQFRRQA QIVFQDPNTS LNPRMTILEI LSEPLYEHNI
PVDDPEDFIT KQLESVGLGR EHLYRYPHEL SGGQKQRVAI LRALLLNPSF VVLDEPTSSL
DVSVQAQILN MLKDFQAQRK LSYLFISHDI GVVKYMSQRI AVMYLGKIVE LGPSDAVFEN
PLHPYTKFLL SAVPVPDPKY ARARKRLAIP GEPPSPINVP PGCRFHPRCP YATEKCRTGE
PPVVEAEPGH FVACWLYSKG
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