Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1212 |
Symbol | |
ID | 4600414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1151530 |
End bp | 1152204 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639773988 |
Product | methionine synthase |
Protein accession | YP_920613 |
Protein GI | 119720118 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.807396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACTGCA GGGGTGTCTA CGCGGAGATC TCGAGGAGGC TCGCCGACCT GGACGCCGGG ACTGTCGAGC GCCTGGTCTC CGAGGCTCTC GAGGCTGGCT GCGACGTCGT GGAGGTCGTC GAGGAGGGGT TGAGAAAGGG GATGGTGGAG GTCGGCGTTA GGTTTGAGAG AGGCGAGTAC TTCCTCCCGG AGCTCGTCGA GGCTGGGGAC ATATTCAACT CGGTGATGGA GAAGTACGTG TTGCCGAGGC TTAAGGGCTC CCGGGCCGGC GTTAGGGGGC GCGTGGTGAT AGGGACGGTG CGCGGGGATA TACACGATAT CGGCAAGAAC CTCGTCGCCA CTATGCTCAG GGTTAACGGC TTCGAGGTGG TGGACCTCGG GGTGGACGTG CCGCCCGAGA GGTTCGTGGA GGCGGTCGAG AAGTACGGGG CGGAGGTTGT CGGTATGAGC GCTCTCCTCA CTACCACGAT GCTGGAGATG AGGAACGTTA TAGACGCGTT GAAGGCGGCG GGCCTCAGGG ACAAGGTCAA GGTGATAGTG GGGGGAGCCC CCGTAACCGA GGAGATCGCG AGGGAGATAG GCGCGGACGC CTACGGCAGG GACGCGGTGG ACGCCGTGGA GAAGTGTGCG AAGCTCGTAG AGGAGCTACG CAGAGCACGC GCTTCAAGTA TATAA
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Protein sequence | MDCRGVYAEI SRRLADLDAG TVERLVSEAL EAGCDVVEVV EEGLRKGMVE VGVRFERGEY FLPELVEAGD IFNSVMEKYV LPRLKGSRAG VRGRVVIGTV RGDIHDIGKN LVATMLRVNG FEVVDLGVDV PPERFVEAVE KYGAEVVGMS ALLTTTMLEM RNVIDALKAA GLRDKVKVIV GGAPVTEEIA REIGADAYGR DAVDAVEKCA KLVEELRRAR ASSI
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