| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1043 |
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| Symbol | |
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| ID | 4600948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 982898 |
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| End bp | 984220 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639773821 |
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| Product | major facilitator transporter |
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| Protein accession | YP_920446 |
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| Protein GI | 119719951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTACACG AGGCGCGCGC AGCGTGTAAA AAAGTTTTAA TTCCCGAGGG TTTTTCTCGT
TTCCCCGTGG GTGGATGGCT GGGGAGGGTT AGGGAGTCCC TTGGAAGGGT TCCTAGGAAC
ATCAAGGTGC TAGCGCTAGG CTGGCTCGTC TGGTCGCCGG TACAGGCGAT GGCGGGGCCG
TACACGCAGC TCTACGTTAG CCGCCTGGGG GCATCTCCCG AGGACATCTC GCTGGTGCAG
TCAGCAACGC AAGTGGCGAA CGCGCTTTCA AGGATAGTCG GCGGCTTCCT CTCGGACAGG
TACGGTAGGA AGAGGGTTCT GTGGGTGGGG ACGTTCCTCG TAGCGCTCGC ATACCTCTTG
ATGAGCGTTG CAACCGACTG GCGGAGCTAC GCCATTGCCA GCGTGCTCAA CGGCTTCGCC
CTCTTTTACC AGCCTGCGCT CGAAGGGATA CAGGCGGACT CGGTTCCCTT GCACCTCAGG
GGGAGGATGA ACGCACTCCT ACACCTGGTG CCGGGCCTGG CATCCTCGCT GTCCCCGCTC
GGCGGAGCCG CATTGGTAAA TGCTTACGGG CTCGTCGGCG GCGTGAGGGT GATATTCTTC
CTCTCGTTCG TTACCGGCGT AGCCATCGCG GTTGCAAGGC TACTATGGAT AGAGGAGACC
CTCGAGCCGA GGGGCTCCGG GGTAAACATG CTCGAATCCT ACGTGGACGC CTTGAGGCAC
GTGTCCCGCG ATGTCTACAC GCTGATAACG CTGGACACCC TCTTCAACCT CGTGGGCGCG
ATGTCCTTCC TCTCGAACTA CTACATGTAC TACTACCTCG GGGTCGACAA GAGCGAGCTA
GCCATGCTGG CCTCCCTGGG AAGCCTCGTG AACCTAGGCC TGCTGATACC CGCCGGGAGG
GCTGTGGACA CCAGGGGGAG GAACTTCTCG ATAACCCTGG GCTTCCTGAT GGGCACGCTG
AGCCAGCTAT TCTTCGTCCT CTCCCCGCCA TCCTCCAGCT TCACGCTACC GGCACTCATC
GTCTCCACGC TTTTCGGAGC GGTGGGAGGA GCCTTCTACG GGCTCGCGTA CTCGTCTCTC
AGGGCGGACC TCGTAGCGAA AGAGTACAGG GGGAGGATCT ACGCCCTCTG GGGGCTCGCG
CCGGCGGCGA GCTGGAGCCT AGGCGCGTAC ATAGGGGGGT GGATGTACAG CAACCTGGGG
CCCCAAACCC CCTTCGTTGC CAGCTTCATG CTCAGAGTCC TGCTCACCCC GCTCGCCCTC
ACCCTCTTCG GGAAGCTCAC GAGGAAAGTC GACCTAGCGT TGCGAAACGT CGAGGGAAGC
TAA
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| Protein sequence | MLHEARAACK KVLIPEGFSR FPVGGWLGRV RESLGRVPRN IKVLALGWLV WSPVQAMAGP
YTQLYVSRLG ASPEDISLVQ SATQVANALS RIVGGFLSDR YGRKRVLWVG TFLVALAYLL
MSVATDWRSY AIASVLNGFA LFYQPALEGI QADSVPLHLR GRMNALLHLV PGLASSLSPL
GGAALVNAYG LVGGVRVIFF LSFVTGVAIA VARLLWIEET LEPRGSGVNM LESYVDALRH
VSRDVYTLIT LDTLFNLVGA MSFLSNYYMY YYLGVDKSEL AMLASLGSLV NLGLLIPAGR
AVDTRGRNFS ITLGFLMGTL SQLFFVLSPP SSSFTLPALI VSTLFGAVGG AFYGLAYSSL
RADLVAKEYR GRIYALWGLA PAASWSLGAY IGGWMYSNLG PQTPFVASFM LRVLLTPLAL
TLFGKLTRKV DLALRNVEGS
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