Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1042 |
Symbol | ubiA |
ID | 4600947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 981832 |
End bp | 982743 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639773820 |
Product | prenyltransferase |
Protein accession | YP_920445 |
Protein GI | 119719950 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.849054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGTCT TCTGCGGCGT GAGGCTGAAA GAACTCTTCA TCTTTACGAG GCCATGGTCC TTCGTAATGA CGGCTATATC GATAACGGGG GCGGCTGCTT ACACGTACTA CCTTGCGCGT AGCTTCGACC CCTTGCTCTA CGCCGCCACG CTTCTCGGGG TAACGTTGCT CCACGCGTCT GCAAACGTGC TGAACGACTA CTACGACACA GTTAGGGGCG TGGACGTCGA GGGGGCTCCG ACTACTCGCT ACAGACCGCA CCCCATCATC GCCGGGAAGA TGTCAGCGGG GCAGGTGCGT AACTTCGGCT TGGCGTTGAT GGCGGGTGGG CTTGCCTTCG CCTTTGCGTT AGCGCTTGTA CGCCAGGTCG TGGTAGTCCT GCTGGCGCTC ACCGGGGTCG TGCTACTCTT CACGTACTCG GGTCCGCCCG GCCTCAAGTA CAGGGCTTTG GGGGAGCTCG GAGTATTCCT GAGCTGGGGC GTCTTCATGT GGCTGGGGAC TTTCTACGTG CTCACGGGGG AGCTTTCCCT TCTACCGGTG CTAGCGGGCA TCCCGGTGGG CCTTCTGGTG GCCGCAGTGC TCACTGCGAA CAACCTGAGA GACATAGAGT TCGACTCCAG TAGGGGGGCT GTAACTCTCG CCGTCGTGCT GGGACGCTCT AGGGGGCTGG CTTTCTACGC CTTCGAAGTG TTTTCGGCCT ACGCCGCAAC GATTGCCCTA GTGTTGCTCG GCGTGCTACC GCTCGGCTCC CTCCTAGCCC TCCTCTCCTT GCCGCAGGCC TTCAGGCTGT GCAAGGCTTT CAGGGAGAAG ATACCGGAGA CTGCGGACCC CCTCACGGCG CAACTCGTGC AGAACTTCGG GCTTCTCTAC ATAGCCGGGA TACTGTTAAG CACCCTCGTT GCGCGAGCAT AA
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Protein sequence | MEVFCGVRLK ELFIFTRPWS FVMTAISITG AAAYTYYLAR SFDPLLYAAT LLGVTLLHAS ANVLNDYYDT VRGVDVEGAP TTRYRPHPII AGKMSAGQVR NFGLALMAGG LAFAFALALV RQVVVVLLAL TGVVLLFTYS GPPGLKYRAL GELGVFLSWG VFMWLGTFYV LTGELSLLPV LAGIPVGLLV AAVLTANNLR DIEFDSSRGA VTLAVVLGRS RGLAFYAFEV FSAYAATIAL VLLGVLPLGS LLALLSLPQA FRLCKAFREK IPETADPLTA QLVQNFGLLY IAGILLSTLV ARA
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