Gene Tpen_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0943 
Symbol 
ID4601072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp893994 
End bp895250 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content65% 
IMG OID639773721 
Producthypothetical protein 
Protein accessionYP_920346 
Protein GI119719851 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGAGC CGCGGTTTCC CGGCGTTGTC TCGCGCCCGT CCCCGTACCT CTGCGCCAGG 
TGTAAGGGCT CGAGGAGGCT CTGCGGGCTA CCGTACTGCC CCATACTCGT CAGGGCTAGG
GAGCTCGCGG GGGTCTACGA GAGGGTGAGG GGGCGCAGGG AGCTCGAGGC GCCGTCTCCC
CCCTCGGTGC TCGTGGGCGA GAAGGGCTAC CCGTACATAC GGGTGGGCGT TAACCTCGTG
GGCGGGGAGG AGGGGTCTCC GAGCCTCTAC GAGGATCCGG GAGCGTGGTG GGGGAGGCTC
GACCTCTACG AGGTCTTGAG GCTGAGGGCC TCCATGGTCT ACTCGTACGG CGTGTACAGC
GCGTCGAGGG CTGTTGGCAG GGTCGGGGAG TCAGTCAGGG AGGCGGCGCT CTCGCTGAAG
CCCGTGGAGT CGGAGGCGGT GTTCAGGCGT CCCCCGGACT TCTCGATGCG CTTCGACCCG
CTATTGAAGC CCGTCGGCTT CTCCGCGGAG GTCGAGAGGC TGTCGGTCGT CAGCAACCCC
TACATCCCCA GGAGGGTGGA CCAGCTCATC GAGGACAGGG TTAAGGCGAG CCGCGCCGCC
GTGGAGCTCT ACGAGAGGGG GTTCGACGTC TACTACATCC AGAGGGTTCT CTCGTCGGGC
GCGCTCGGAG TATCCAAGAA GTTCGTGCCC ACCAGGTGGG CTATAACGGC TGTCGACAGG
CTGATAGGAG ACTACCTGCT GGGCAAGGTC AAGGGCTACC CGGAGGTCTC CTCCTACGAG
CTGTACCACT CGTCGTACAT CGGCAACTAC TACAGCCTGC TCCTCATGCC CGGGAAGTGG
TCGCTCGAAA TGGTCGAAGT CTGGCTACCG AACTCCGTGT GGGTCCCGGG CTCCGAGCCC
TACGTATCCA CCGTGCACGA GTGGAGCGAC GGGAAGCCGA GCGGGGAGGA CGGGGGCTAC
GAGGCTATCC GGCTAGCTGT GCTCGAACAC CTCGCGAAGC GGGGAAGGGT TGCCAGCGTC
CTTGCAGTGA GGGAGATCAC GCCCGAGTAC TTCGCGCCCG TTGGCAACTG GCAGATACGG
GAAAGCGTGA GGGCGGCGCT GAGGGGTGGC GGCGAGAGCT TCCCGAGCCT CGGGGAGGCT
CTCGAAGCGC TGAAGGAGAA GCTCAGGGTA CCCCTGAACT TAGTGCTCTC GAGGAGCACG
TTGCTCGCGG CGAGGACTAG GCAGCGCTCA ATCACCGAGT TCCTGCACCG CGAATGA
 
Protein sequence
MEEPRFPGVV SRPSPYLCAR CKGSRRLCGL PYCPILVRAR ELAGVYERVR GRRELEAPSP 
PSVLVGEKGY PYIRVGVNLV GGEEGSPSLY EDPGAWWGRL DLYEVLRLRA SMVYSYGVYS
ASRAVGRVGE SVREAALSLK PVESEAVFRR PPDFSMRFDP LLKPVGFSAE VERLSVVSNP
YIPRRVDQLI EDRVKASRAA VELYERGFDV YYIQRVLSSG ALGVSKKFVP TRWAITAVDR
LIGDYLLGKV KGYPEVSSYE LYHSSYIGNY YSLLLMPGKW SLEMVEVWLP NSVWVPGSEP
YVSTVHEWSD GKPSGEDGGY EAIRLAVLEH LAKRGRVASV LAVREITPEY FAPVGNWQIR
ESVRAALRGG GESFPSLGEA LEALKEKLRV PLNLVLSRST LLAARTRQRS ITEFLHRE