| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0636 |
|---|
| Symbol | ubiA |
|---|
| ID | 4601433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 588565 |
|---|
| End bp | 589398 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639773409 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_920042 |
|---|
| Protein GI | 119719547 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCGC GTGTAAAGGC TTTCCTAAGG CTTTCCAGGA TAGAGCACGG AGTAATGTCA
GGCTTGGCCG TTATAGCTGG GGCTTTGTCC ACACAAGTGT TTGTAGCCGA CAAGGCAGTG
CTTGCTGCAC TATCGGCATT CTTCGCCGAA ACGTCGCTCT TCGCCTTTAA CGACGTCTTT
AACGTGGAGG AGGACAAGGT GAATAACCCT ACGAGACCCA TAGTCGCTGG TGAGATTTCG
CTCCGAGAGG CTCTTCTCTT TGCCATCGCC ACAGGAATAA TGTCGGTCGT ATTCGCGTCT
GCAATTGGCC CGTTCCCCCT AGCGGTCATA GCCTTAGCCC TCGGGCTCGG AATACTTTAC
GATGCCATGT TGAAGAGGCA CGGCTTCCTG GGAAACCTTA TAGTCGCGGG GCTGACGGCG
TTTACATTCC CGTTCGGCGC AATAGCGGTG ACGGCTTCTC CAACAGAGAA ATCACTTCTC
TTCTTTGCAG TAGCTTTTCT GGCAAACGTT GGCAGAGAAA TCGTAAAGGG TATCAGGGAC
CTCGAGGGGG ACATGAAGGC GGGTATCTGC ACGTTGCCAT GTGAAGTAGG AGAAAAGCCT
GCCGGCGTCA TCGCCGCTGC CTTCATGTCG CTGGCTGTTG TCCTCAGTTT TTCGGGTCTA
GCGTTTGTAA GCTTAAAGCA CCTCTACCTC GCGCTTATAC TGGTAACGGA CGTCATCTTC
GCTTATTCGG CAGCTGTGAT GGCTCTTAAG GCGGACAGGC ACCACGCGGA GGTTGCGAGA
AGAATAACGT TGCCGGCAAT GCTCCTAGCA ATAGTAGCGT TCACGTTGCC GTAG
|
|---|
| Protein sequence | MHARVKAFLR LSRIEHGVMS GLAVIAGALS TQVFVADKAV LAALSAFFAE TSLFAFNDVF
NVEEDKVNNP TRPIVAGEIS LREALLFAIA TGIMSVVFAS AIGPFPLAVI ALALGLGILY
DAMLKRHGFL GNLIVAGLTA FTFPFGAIAV TASPTEKSLL FFAVAFLANV GREIVKGIRD
LEGDMKAGIC TLPCEVGEKP AGVIAAAFMS LAVVLSFSGL AFVSLKHLYL ALILVTDVIF
AYSAAVMALK ADRHHAEVAR RITLPAMLLA IVAFTLP
|
|---|
| |