| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0624 |
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| Symbol | |
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| ID | 4601411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 580573 |
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| End bp | 581316 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639773398 |
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| Product | proliferating cell nuclear antigen PcnA |
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| Protein accession | YP_920031 |
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| Protein GI | 119719536 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGAAAT TCGTATTTCC TGATGCCCGT GAATGGAAGT ACATAATAGA GAGCCTTGCA
ACAATAGTCG ACGAGGCAAA CTTCGTCGCA TCGCCCGAGG GACTGAAGCT GAGGGCGCTC
GACCCCGGAC GTATCGCCAT GGTCGACCTC TTCATACCCT CGAACCTCTT CGAAGAGTAC
TCGGTAGACC AGGAGACGAA GATAAGCGCC GTCCTAGACG ATATCGACAA GGTCCTCAAA
AGGGCTAAAA GCGACGACAA AATATCCTTC GAGGTATCCC AGGGCAGGCT GATCATAACG
CTATCCGGGA GAGCCGAGAG AAGGTTTAAG TTCCCGTTGA TAGATATAGC TGGGCAAGAG
CTACCATCAC CGAAGCTTAA CTTCACAGTA GCCGCTAAAA TGCTGAGCGA TACTTTTAGG
GACGCGTTAA AGGACGCGTC GCTCGTCTCG GAGTCCGTTA AGCTCAAAGC AGAAGACGAG
TCGCTGTGGC TACTGGCCAG AAGCGATAAA GGAGAGATAG AGAGCCGCTT CTCCATAGAG
ACGGGAAGCC TCGTCGAGAT AGACGTTAAA GAGGCGGCAG AGGCGAGCTA CGGGATAGAC
TTCCTGGATA AGATAGTGTC GAAGGCGTAC AGGATCAGCG ATATACTCGG CCTGCGCTTT
GCCACGAACA TGCCTCTCGA AATGACGTTC GACATAGCCG GCGGAGGTAC ACTGAAGTAC
CTTTTAGCTC CTAGAATGGA GTAG
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| Protein sequence | MVKFVFPDAR EWKYIIESLA TIVDEANFVA SPEGLKLRAL DPGRIAMVDL FIPSNLFEEY
SVDQETKISA VLDDIDKVLK RAKSDDKISF EVSQGRLIIT LSGRAERRFK FPLIDIAGQE
LPSPKLNFTV AAKMLSDTFR DALKDASLVS ESVKLKAEDE SLWLLARSDK GEIESRFSIE
TGSLVEIDVK EAAEASYGID FLDKIVSKAY RISDILGLRF ATNMPLEMTF DIAGGGTLKY
LLAPRME
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