Gene Tpen_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0471 
Symbol 
ID4602030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp429458 
End bp429808 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID639773239 
ProductDNA-binding TFAR19-related protein 
Protein accessionYP_919883 
Protein GI119719388 
COG category[R] General function prediction only 
COG ID[COG2118] DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTTATG ATGAAGGCGG AGAAGAACTA GAAGAGATTA AACGGCGAAA ACTGTTAGAG 
TACCAGCGCG CCCTCGAAGC CGAGAAAGCC AAAGAGGAAC AGAAAGCACG AGAGGAGGCT
ATGCGGCAGG AGATTTTAAG GCGTATTCTC ACACCGGAGG CTCGTGCAAG GCTCTCTAAT
CTCAAGCTCG TGAAACCGGA GCTTGTAGAG GCGTTGGAGA TTCAGCTCAT ACAGCTCGCT
GAGTCTAGAA GTGTAAGGGT ACCTATAGAC GACGAAACCC TTAAACAGAT ACTTGCAAGA
CTATACGAAG CACAACGCGC GAGAGAGGTA AAGTTCAGGG TGAGCTTTTA G
 
Protein sequence
MSYDEGGEEL EEIKRRKLLE YQRALEAEKA KEEQKAREEA MRQEILRRIL TPEARARLSN 
LKLVKPELVE ALEIQLIQLA ESRSVRVPID DETLKQILAR LYEAQRAREV KFRVSF