| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0429 |
|---|
| Symbol | |
|---|
| ID | 4602108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 390339 |
|---|
| End bp | 391247 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639773194 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_919841 |
|---|
| Protein GI | 119719346 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGC TTAGCCTTGG TAAGGTATTC AGCGCCATTA TTGAGGAGGT AGCGTATACT
GAGCTAGACG AGAAAACACT GAAAAGACAC GCCGATGCAT TCGTGTTGAG GCTCGTCGAG
GCAGGAGTCG CGCTTGAGGT TGCAGAGGCA CTTGTAGCGG ATCTCTCCGG GCGGATCTCC
GGGAAGAAGC TTGGGAGGTT CGCGGATAAG AGGAAGGCCT TGCTAGACGA GCTCAGAGCA
CTGATCAGGG ACGTCTTTCT CTCGGCGGGT AGCGTGGACC TCGACGGCTT GGTAAAACGC
GGGGTAGCCG GTAAGGGCTT CTTCTCAATA CTTTTCCTAG GGCCGAACGG CCACGGAAAA
ACAACCACCG TGGCTAAGCT TGCGTACAGG TTTAGGAAGC AGGGCTACAG AGTAGCGATC
GCTGCCGCCG ATACATTTAG GGCGGGCTCG ATAGAGCAAG TCTCCCAGTG GGCTTCGAGG
GCTGGCGCCG AAGTTGTCTC GCTGGGCTAC AACGCTGACC CCGCCGCTGT GGCCTACGAA
GCTGTGAAGA AAGGAGAGAA GGGCGACTTC CAGGTCGTAC TCATAGATAC TGCGGGGAGA
ATGCACACAA AGAAGAACCT TATGGACGAA ATGAAGAAGA TAGCTAGAGT GGCCTCTCCA
GACTTCAAGG TGTTTGTTGG AGACGCCCTT GTGGGAAACG ACGCCGTAGA GCAAGCTAAA
ACGTTCTTCA GCGAGGTCGG GTTCGATGGA AGCATACTGA CAAAGTTCGA CGCGGACATC
AGGGGTGGTG CTGCGCTGTC AGTAGTGTAC GTGACGAAGA AGCCGTTGCT CTACGTTGGG
ACGGGTCAGG GCATCGAGGA CCTTAAGGAG TTCAACGTCG AGGAGTACCT GGGAATGCTC
TTCGAATAG
|
|---|
| Protein sequence | MPKLSLGKVF SAIIEEVAYT ELDEKTLKRH ADAFVLRLVE AGVALEVAEA LVADLSGRIS
GKKLGRFADK RKALLDELRA LIRDVFLSAG SVDLDGLVKR GVAGKGFFSI LFLGPNGHGK
TTTVAKLAYR FRKQGYRVAI AAADTFRAGS IEQVSQWASR AGAEVVSLGY NADPAAVAYE
AVKKGEKGDF QVVLIDTAGR MHTKKNLMDE MKKIARVASP DFKVFVGDAL VGNDAVEQAK
TFFSEVGFDG SILTKFDADI RGGAALSVVY VTKKPLLYVG TGQGIEDLKE FNVEEYLGML
FE
|
|---|
| |