Gene Tpen_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0422 
Symbol 
ID4602101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp383514 
End bp383909 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content57% 
IMG OID639773187 
Productribosomal protein S6e 
Protein accessionYP_919834 
Protein GI119719339 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGA AGGTATCCTT CAAAGTGGTG ATCTCCGACC CTAAGACCGG GAAAGCCGAG 
CAAGTAGAGG TGAGCGGCGA GCAGGCTCTC AGACTCATCG GGCTGAAGAT AGGCGATATA
ATCGACGGAG GGCTAGTAGG TAAGCCGGGG GTAAAGCTTC AGATACGCGG AGGCTCTGGG
AGGGCCGGGG AGCCTATGCG CCCAGACATA GAGGGGGCGC GCAAGGGGTA CTTCCTTCTC
TCAGGACCTC CGGGTTATTG GCCTCGCGAG AAAGGCGAGA GGCGGAGAAG GTTCGTGAGG
GGGAACGTTA TCTCCGACGA TATAGTTCAG ATAAACACTG TGATAGTCTA CGACGAGGAA
AAAGCCCAGC AGGCTACCCC TCACGCGCGG GGCTAA
 
Protein sequence
MSSKVSFKVV ISDPKTGKAE QVEVSGEQAL RLIGLKIGDI IDGGLVGKPG VKLQIRGGSG 
RAGEPMRPDI EGARKGYFLL SGPPGYWPRE KGERRRRFVR GNVISDDIVQ INTVIVYDEE
KAQQATPHAR G