Gene Tpen_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0320 
Symbol 
ID4600971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp285853 
End bp287307 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content56% 
IMG OID639773080 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_919732 
Protein GI119719237 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGGC TTCGAGAAGT CTTTGTGGTG CGGCTGGGAG AGATCACAGT GAAGAGTAAG 
AAGTCCAGGG AGCGTTTCGA AAAGAGGTTG CTGGAGAATA TCCGCGACGC GCTTAGCTCC
TCCGGTGTGA GCGGAGAAGT GAGGAGGGAG TACGGGAGGA TCTACGTTTA CGCGCCGAGT
AGCTTCGCCG GTGTTCTAAG GAGGGTGTTC GGGATAACGT CCTTCTCGAT GGCTCTTGAG
TACGAGTTCA AGGCTTTGGA CGATATCGCG AGCACGGTTT ACAACCTTTA CTGCGATAAG
CTGAAAGGTA AAACCTTCGC GGTAAGAGCC AGGAGGACTG GAGACCACCC CTTTACTTCG
ATGGACGTTG CGAGAAAGGT TGGCGAGAAG CTTTACCCCT GCTCGAGCGG CGTCGATCTG
TCGAACCCAG AGGTTCAGGT TTTCATAGAG GTTAGAGGGA GCAGGGCCTA CTTCTACACC
GACGTCGTAA GGGGGTATGG AGGCCTCCCC GTGGGTAGTG AAGGTAAAGT ACTAGCGTTG
ATATCCGGTG GCTACGACTC TGCGGTAGCC GCGTGGTACA TGCTCAAGAG AGGCGCGGAG
GTACACTACC TGTACTGCAA CATGGCGGGG GACCTAACCA AGAGCCTTGT ACTCTCCGTT
GCGAAGAAGC TGGCAGATTC CTGGAGCTAC GGCTATAAAC CGAGGCTCTA CGTCGCCGAC
TTCTCCCCGT TGCTTAGAGA GCTTAGGGCG AAAGTCGCCC CTGAGCTTTT CGGGGTAGTT
CTAAAAAGGT ACATGTACAG GGTTGCAGAG GCGATTGCAG GTAGGATCGG GGCGATAGGG
ATAGTCACAG GGGAGAGCCT TGGACAGGTC TCCTCTCAGA CACTCGAAAA CCTCTACGTA
GCCTCCCAAG CCACCTCCAT GCCCATTTAC AGGCCCCTCA TAGGCTTCGA CAAGGAGGAG
ATAATCTCCA AGTCCAAGGA GATAGGGACC TACGAGGAGA GCTCGAAGGT AAAGGAAGTC
TGTGGAGTGT TCTCCGTGCA TCCCAAGACG AGGTCCAGGC TGGAAGAGGT AGAAAGAGAG
GAGAGCAAAC TAGACCCGGC GATCCTGGGG AGGGTTCTAT CCACGGTGGA GGAGATAGAC
CTTCGCTCAG CGACGCCGAG CCCCCTCATA GAGGTAGACG TGGATGCCCC GCCCGAGGGG
AGCATTATAG TCGACGTGCG CCCGAAGGAG AAGTACGAAG AGGGGCACAT ACCGGGGAGT
CTCCACATAG AGTTTACCGA GCTACCCCTC TTCCTCGAAA GGCTCGATAA GAGCAAGACC
TACGTCTTTG TATGCGACGA GGGAGGGTTA AGCCGCGAAG CCGCATACAT GCTGAGAAAA
GCCGGGTTTA ACGCGTGGAG CCTAAAGGGA GGATTAAGGA GGTTCTCACG CCTCGCTCGG
GAGAGCTCCG GGTAG
 
Protein sequence
MEGLREVFVV RLGEITVKSK KSRERFEKRL LENIRDALSS SGVSGEVRRE YGRIYVYAPS 
SFAGVLRRVF GITSFSMALE YEFKALDDIA STVYNLYCDK LKGKTFAVRA RRTGDHPFTS
MDVARKVGEK LYPCSSGVDL SNPEVQVFIE VRGSRAYFYT DVVRGYGGLP VGSEGKVLAL
ISGGYDSAVA AWYMLKRGAE VHYLYCNMAG DLTKSLVLSV AKKLADSWSY GYKPRLYVAD
FSPLLRELRA KVAPELFGVV LKRYMYRVAE AIAGRIGAIG IVTGESLGQV SSQTLENLYV
ASQATSMPIY RPLIGFDKEE IISKSKEIGT YEESSKVKEV CGVFSVHPKT RSRLEEVERE
ESKLDPAILG RVLSTVEEID LRSATPSPLI EVDVDAPPEG SIIVDVRPKE KYEEGHIPGS
LHIEFTELPL FLERLDKSKT YVFVCDEGGL SREAAYMLRK AGFNAWSLKG GLRRFSRLAR
ESSG