| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0263 |
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| Symbol | |
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| ID | 4601681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 231333 |
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| End bp | 232445 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639773018 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_919676 |
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| Protein GI | 119719181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.161308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGATCA GGAAGCTCGA GCTCTTCTAC CTCGAGATGA AGCTTAAAGA AGAGTTTAGG
ACGAGCTTTG GAAGTGTTTC CACGAGGCCG GTTGTGCTAG TAAGGGTGGA GGAGAAGGGG
GGCGAGGAGG GGTGGGGAGA ACTTGTAGCA GACCGGGGCC CCTGGTATAG CTACGAGACC
TACGAGACGT CGAGCCTGGT GATCCGGAAG TTTATCGCGC CGAGCCTGGT GGGAAGAGAT
ATTGAGGAGG TGGAAGATTT TCACAGACTG GTGGCTTCGA TACGTGGATA CCCCATGGCG
AAGACTGCTG TCGAGGAGGC GCTGCTGGAC CTAGAGGCGA GAATGGAGGG GAGGAGCGTC
TCGGAGGTTC TCGGAGGCTC CAGGCAGGAA ATAGAGGCGG GGGTTAGCAT AGGTATAAAG
GCTAGCGTTG AGGAGCTTCT AAGAGAGGTA AGGAGGAGGC TGGAAGAGGG TTACCAGCGT
ATAAAGGTGA AGATTAAGCC GGGCTACGAC GTCGAGGTCG TGAAGAGGAT AAGGGAGGAG
TTCGGGGACA TCAGGCTCCA AGTAGATGCT AACGGAGCGT ACTCTTTGAG AGACATCGGA
GTGTTCAGGG AGCTCGATAG GTTTAACCTG CTCATGCTAG AGCAACCCCT CGCCTACGAC
GATCTCTACG AGCACAGCGT TTTGAGCAGG AAGATCTCTA CCCCTGTGTG CCTGGATGAG
AGTATTAGGA GCTTGCACGA CCTGGTGGTT GCAAGCATCC TGGGGTCAGC GGAGGTCGTG
AACGTTAAGC CTGCAAGGGT TGGGGGAGTG CTCAAGGCTA AAAGCATCTT AGAAGTCGCG
GCGAAGCTCG GGTGGGGGGC GTGGGTTGGC GGAATGCTGG AAACAGGCAT AGGCAGGGCG
TTCCTAGTCG CCCTCGCGTC CCTTCCGTTC GTTAACTACC CTAACGATAT CTCCGCGAGC
AACCGCTACT GGGATGAGGA CATAGTCGAG CCTCCCTGGG AGATAACCCC TCGCGGCACG
ATAGCTGTTC CCAGGAGGCG CGGGCTCGGA GTAGAGGTAA AGAGAGAGCT CGTAGACAGG
CTTTCGCTGG AGAGGTGGAC TGCCACGTAC TGA
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| Protein sequence | MEIRKLELFY LEMKLKEEFR TSFGSVSTRP VVLVRVEEKG GEEGWGELVA DRGPWYSYET
YETSSLVIRK FIAPSLVGRD IEEVEDFHRL VASIRGYPMA KTAVEEALLD LEARMEGRSV
SEVLGGSRQE IEAGVSIGIK ASVEELLREV RRRLEEGYQR IKVKIKPGYD VEVVKRIREE
FGDIRLQVDA NGAYSLRDIG VFRELDRFNL LMLEQPLAYD DLYEHSVLSR KISTPVCLDE
SIRSLHDLVV ASILGSAEVV NVKPARVGGV LKAKSILEVA AKLGWGAWVG GMLETGIGRA
FLVALASLPF VNYPNDISAS NRYWDEDIVE PPWEITPRGT IAVPRRRGLG VEVKRELVDR
LSLERWTATY
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