Gene Tpen_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0146 
Symbol 
ID4600638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp121100 
End bp122068 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content56% 
IMG OID639772900 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_919559 
Protein GI119719064 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCG TGCTCACGGT TAGAAACCTG CGCCTCTACT TCTCGACGCG TAAGGGGGTA 
GTCAAGGCTG TTGACAACGT GAGCTTCGAC CTTAAGAAGG GAGAGACCCT TGCCATAGTC 
GGCGAGTCCG GTTGCGGTAA GAGCTCCCTG GCGAGGGCCC TGATAAGGCT CCTGCCGAGG 
AACGTCCACA CGTTCACCGG AGAGATATAC ATCAACGGTA ACGACGTGAT GAAGCTCAGC 
GACGAGATGT TCAGAAGGCT TATACGCTGG CGTAAGATCT CCATGGTCTT CCAGGGAGCC 
CAGAACAGCC TGAACCCCGT CCTCAAGGTA GGCTTCCAGG TAGCGGAGCC CCTAATGATT 
CACAACAACA TGTCCCCCGA GGAGGCCCTC GCAGAGGCGA AGAAGTACCT GAGGCTCGTG 
GGGATACACG AGAGCTTTGC CGACAGGTAC CCCTTCGAGC TTTCGGGAGG TATGAAGCAG 
AGGGCTGTCA TAGCTATGGC GCTAATCACT CACCCCGACA TAATAATTCT GGACGAGCCG 
ACGTCCGCGC TAGACGTAAT CACGCAGGCC AACATAATCA ACCTGCTCAA GCGAATTAAG 
AACGAGATGG GTCTCTCATA CATCTTCATC ACCCACGACA TAGCGGTTAC CAGCGAGCTA 
GCGGACCGCG TAGCAGTTAT GTACGCGGGA GAGATAGTCG AGATAGCGGA TGCAGACGAG 
TTCTACACAA ACCCCAGGCA CCCGTACTCC GAGAAGCTTA TGGCGAGCGT ACCAACTCTG 
AGGACGGACA AGAAGCTGGA GTTCATACCC GGCGCTCCTC CAAGCCTGAT AAACCCGCCG 
CCCGGGTGCA GGTTCCACCC GAGGTGCCCC TACGCCTACG AGAGGTGCCT CAGGGAGAAC 
CCCCCGCCCT TCGAGCTTAA GACCGGTTCC TTCGTTAAGT GTTGGTTGTA TCACGAGGGG 
AAGAGGTGA
 
Protein sequence
MSSVLTVRNL RLYFSTRKGV VKAVDNVSFD LKKGETLAIV GESGCGKSSL ARALIRLLPR 
NVHTFTGEIY INGNDVMKLS DEMFRRLIRW RKISMVFQGA QNSLNPVLKV GFQVAEPLMI 
HNNMSPEEAL AEAKKYLRLV GIHESFADRY PFELSGGMKQ RAVIAMALIT HPDIIILDEP 
TSALDVITQA NIINLLKRIK NEMGLSYIFI THDIAVTSEL ADRVAVMYAG EIVEIADADE 
FYTNPRHPYS EKLMASVPTL RTDKKLEFIP GAPPSLINPP PGCRFHPRCP YAYERCLREN 
PPPFELKTGS FVKCWLYHEG KR