Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0106 |
Symbol | |
ID | 4600854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 81929 |
End bp | 82816 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639772860 |
Product | phage integrase family protein |
Protein accession | YP_919519 |
Protein GI | 119719024 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGTG TGAAAGCTCC CTTCGCTGAA AGGAGTAACG ACGAGTTAAT AGATCTCTAC ATTTCTCACC TAGTAGCGAG GAACCGCTCG GAGAAAACGA TCAAGAGCTT TAAAAGCATC CTCGAAGAAT TCGTTCGCTT CCTGGGGGAC AGGCACGTAT CGCAGGTAAC GGTGTACGAC GTGGACTTCT TCCTCGCGCA TCTAAGGAGA AAAGGCTGGA AAAAGGACAG CATATACACC GCGGCGGTCG CCGTGAAGCG CTTTCTGGAG TTCTTGGGGC TTGGAGGCAA CATTGCCGGC TTCGAGCTGC CCAAGCGCGA AAAGAGGCTT CCAAGGTACC TCGAGGCGGA GGAAGTCTTC AGAATGGTGA ACGCCGCGGA GAACCTGAGA GACAAGCTAA TAGTCCTGCT ACTCTTCACG ACGGGTCTCC GCGTCAGCGA GCTCGTATCG CTAAGAGTCA GCGACGTAGA CCTCGAAAAG AGGACGCTCC GCGTTAGAGG GAAGGGGTCC AAGGAGAGGC TAGTATACTT CCCGGACTAC GTAGCCGACC TCTTGAGGAG CTATATGAAG GGCCTTAACT CTGAGTGGCT CTTTCCCTCG GAGACAGCCG AGCACATCCA CTACACCACC GTTGAACGCG TGTTGAAGCG CCTAAAGGAG AAGGCGGGGA TCGAGAAGAA AGTCACGCCT CACACTCTGA GGCACTCCTT CGCGACCCTA AGCCTGGCGG CCGGCCTGGA TATTCGAGAG ATACAGGAGC TGCTGGGGCA CTCGAACTTG AACACCACGC AGGTGTATGC GCACGTCTCG CGTGAAAGGC TGAAGAGGGA CTACGAAAGG GTTTGGAGCT CCCTGCTAGA CCCGCGTAGC GCTAAGGAGC AGTCCTAG
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Protein sequence | MSSVKAPFAE RSNDELIDLY ISHLVARNRS EKTIKSFKSI LEEFVRFLGD RHVSQVTVYD VDFFLAHLRR KGWKKDSIYT AAVAVKRFLE FLGLGGNIAG FELPKREKRL PRYLEAEEVF RMVNAAENLR DKLIVLLLFT TGLRVSELVS LRVSDVDLEK RTLRVRGKGS KERLVYFPDY VADLLRSYMK GLNSEWLFPS ETAEHIHYTT VERVLKRLKE KAGIEKKVTP HTLRHSFATL SLAAGLDIRE IQELLGHSNL NTTQVYAHVS RERLKRDYER VWSSLLDPRS AKEQS
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