Gene Tpen_0064 details

Gene Information

• Locus tag: Tpen_0064
• ID: 4600546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 48287
• End bp: 48808
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639772818
• Product: hypothetical protein
• Protein accession: YP_919477
• Protein GI: 119718982
• COG category: [S] Function unknown
• COG ID: [COG4720] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGGAA AAGGAAGAGC GAGCCTATTC ATAGCGCTTG CTTCTATACT CTCCGCCCTA 
ACCGCCGTCC TAACGTACTT TCCCGGCTTA GCCCTCCCGT CCCCAACCGG CGGCTACACG 
CACGTTGGAG ACACTATAAT CTACGTCTCC GCGCTACTCT TCGGGCCGTG GATGGGGCTC 
GTGGTAGGGC TCGTTGGCCC CGTGATCGCC GATTTCCTCG TAGGCTACCC GAGGTGGTAC 
GTGACGCTCG TAGCGCACGG GCTGCAGGGC TTCATAGCGG GTTACGGCGC CGGTAAGAAG 
TTCAAAACGC AGCTAGTGCT CATGGTAGCC GCCGGGCTTG TGATGTCGTT CACCTACTTC 
GTTGTGAACG TTTACGTCAA GGGGCTCGGG CCAGCGCTCG TATCGCTTGC CAGGGACATC 
TTCGGGCAAA CCCTCGTTTC GATAGTACTC GCGTCGCTAC TCCTTAAAGC CCTCGAGAAG 
GCTCCGGCGG TTAAGAGGGC CCAGGAGCTT CTCCGAAAGT AA 

 

Protein sequence

MAGKGRASLF IALASILSAL TAVLTYFPGL ALPSPTGGYT HVGDTIIYVS ALLFGPWMGL 
VVGLVGPVIA DFLVGYPRWY VTLVAHGLQG FIAGYGAGKK FKTQLVLMVA AGLVMSFTYF 
VVNVYVKGLG PALVSLARDI FGQTLVSIVL ASLLLKALEK APAVKRAQEL LRK