Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0019 |
Symbol | |
ID | 4600522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 15929 |
End bp | 16618 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639772772 |
Product | hypothetical protein |
Protein accession | YP_919432 |
Protein GI | 119718937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.857694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGACG GTGAGAGGAG GCCTTCGAAG TTCGTTTCCA GTAGGAGGAT AAGGGCGTTT TTCACCAGGG AGGGTGACGT CCTCTACCTC GACCTCGACG GGGAGACGTA CAGCGGGGTC GGCGACTTCG TACCCATACC TGTAGGCAAG CTTCGGGGGT TAAGGCTGGA GGAGATCCCC GAAGGCGTGT CGATAGAGCC CGTAGAGTAC ATGGAGAAAA ACATCTTCTA CATCCTGAGG ATGGGCTCTC TCTTCACATA CGAGGTTAAA GTTAACAGGG GAGGAGTCGA GGTAAGCGTT GACGAGTGGT TCTCCGAGTG GAGGTCGTAC ATAGGGATAG AGGCGTACCA GGAGGCTCTT CTCTCCGTGT TAAAGGAGCT CATGGACTCT GGCTTCGTTA GCTACGTGGA TTTGGAGAGC GGAGAGGAGA TGCTCTACGT CTCTTTTGTT GTGCCGCTCC CCGGGAGCTT GACGGTGTTC AAGGCTTTGA AGGTCGTAAG GCGGCTGGTG AGAGAGCTCG AGCTAGAGGT TACTCGCCGC GCTAGTATAC TGGCGCTGAG GGAGGCTAAG AGGAAGCTGA GGAGGATAGC GGAGAGAGGC TTGGAGGAGA GTTTTCTCGA GAGGGTTAGC AGGATTTTTT ACAGCGGTGT AGGCGGAGGG GAGGAAGGAA TTTCCAAAAA ATCGAAATAG
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Protein sequence | MGDGERRPSK FVSSRRIRAF FTREGDVLYL DLDGETYSGV GDFVPIPVGK LRGLRLEEIP EGVSIEPVEY MEKNIFYILR MGSLFTYEVK VNRGGVEVSV DEWFSEWRSY IGIEAYQEAL LSVLKELMDS GFVSYVDLES GEEMLYVSFV VPLPGSLTVF KALKVVRRLV RELELEVTRR ASILALREAK RKLRRIAERG LEESFLERVS RIFYSGVGGG EEGISKKSK
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