Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0005 |
Symbol | |
ID | 4601654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 4314 |
End bp | 5123 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639772758 |
Product | ABC transporter related |
Protein accession | YP_919418 |
Protein GI | 119718923 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.964795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGGT TCGAGAACGT TAGGTTCAGC TACGGGGAAG GGCTCTTCGA GATGAGGGAC CTCAACGTAG AGATTAAGCG AGGAGAGTTC GTTGGCGTTA TAGGGCACAG CGGCGCCGGG AAGACCACGT TCGCCAAGCT GGCCGTGGGG CTCCTCAAGC CGCGTAGCGG CAGGGTGCTC GTCGACGGGA AGGATACGAG GACGACCCCC GTCTCCGAGC TAGCTAGGAA GGTCGGCTAC GTGTACCAGA ACCCGGATCT CATGATATTC TCTCCCACGA TACTCGACGA GGTAGGATTC GCGCTGAGGA ACATGGGCTA CCCGGAGAGC AAGGTTAAAG ACATGGTGCT ACGAGCGCTT GAAAGCGTCG ACTTGTCGAA GCCTCTCGAC GCCTCCCCGC ACATGCTGAG CTTCGGGGAA AAACACAGAC TCGCAATAGC CAGCGTGCTC GTGACGGAGC CCGACGTCCT GATCCTAGAC GAGCCGACAA CCGGGCTCGA CTACGCGAGG TGCCTTCAGC TATTCAGGGT TCTCGAGAAG CTTTACAAGG GCGGGAAAAC AGTCGTTGTG ATAACGCACG ACTTGGACCT GCTGGGCATG TTCTCGACGA GGGTTCTCGT ATTTGAGAAG GGTAGGCTGA TTAGGGACGG CGCGACGGAG GAGGTCCTTC TGGACACGGA GTTCCTTGAG GAGAAGGGCT TCATCCCGAC GCAGCTTCAA AGGCTGTCGA AGATGCTCGG CTTAAAGGCT TATTCTCCCT CGAAGATCGC GGAGTACATA ATCGAGCTTA GGAAAAAGAA GGGTATTTAA
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Protein sequence | MIRFENVRFS YGEGLFEMRD LNVEIKRGEF VGVIGHSGAG KTTFAKLAVG LLKPRSGRVL VDGKDTRTTP VSELARKVGY VYQNPDLMIF SPTILDEVGF ALRNMGYPES KVKDMVLRAL ESVDLSKPLD ASPHMLSFGE KHRLAIASVL VTEPDVLILD EPTTGLDYAR CLQLFRVLEK LYKGGKTVVV ITHDLDLLGM FSTRVLVFEK GRLIRDGATE EVLLDTEFLE EKGFIPTQLQ RLSKMLGLKA YSPSKIAEYI IELRKKKGI
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