Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_R0028 |
Symbol | |
ID | 9156546 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2479948 |
End bp | 2483034 |
Gene Length | 3087 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00806626 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTAAGTGTCT AAGGGCGCAC GGTGGATGCC TTGGCGCAAG GAGCCGATGA AGGACGTGGG AGGCTGCGAT ATGCCTCGGG GAGCTGTCAA CCGAGCTGTG ATCCGAGGAT TTCCGAATGG GGAAACCCAG CACCAGTCAT GTGGTGTTAC CTGCCGCTGA ATATATAGGC GGTGTGGAGG GAACGAGGGG AAGTGAAACA TCTCAGTACC CTCAGGAAGA GAAAACAATA GTGATTCCGT GAGTAGTGGC GAGCGAAAGC GGATGAGGCT AAACCATGCA CATGTGATAC CGGGTAGGGG TTGTGTGTGT GGTGTTGTGG GGTTCATCGT TTCAGTTCTA CCTGGCTGGA CGACAGTAAG AAATCATCAT GTTAGGTGAA GTGGCCTGGA ATGGTCTGCC GGAGAGGGTG AGAGTCCTGT AACCGAAAAC GTGGTGACTG TTGTGATGGA TTCCCGAGTA GCAGCGGGCC CGTGAAATCC GCTGTGAATC TGCCGAGACC ACTCGGTAAG CCTAAATACT ACCTTGCGAC CGATAGCGGA CTAGTACCGT GAGGGAAAGG TGAAAAGTAC CCCGGGAGGG GAGTGAAATA GTACCTGAAA CCGTGTGCTT ACAATCCGTC AGAGCCCTCG TTGTGGGGTG ATGGCGTGCC TTTTGAAGAA TGAGCCTGCG AGTCAGTGCT CGGTGGCGAG GTTAACCCGT TGTGGGGTAG CCGTAGCGAA AGCGAGTCCG AATAGGGCGT GTGAGTCGCC GGGTCTGGAC CCGAAGCGGA GTGATCTACC CATGGCCAGG GTGAAGCAGC AGTAAGATGT TGTGGAGGCC CGAACCCACT TAGGTTGAAA ACTGAGGGGA TGAGCTGTGG GTAGGGGTGA AAGGCCAATC AAACTCCGTG ATAGCTGGTT CTCCCCGAAA TGCATTTAGG TGCAGCGTCA CGTGTTTCTT GCCGGAGGTA GAGCTACTGG ATGGCCGATG GGCCCTCACA GGTTACTGAC GTCAGCCAAA CTCCGAATGC CGGTAAGTGA GAACGTGGCA GTGAGACTGC GGGGGATAAG CTTCGTAGTC GAGAGGGAAA CAGCCCAGAT CGCCGGCTAA GGCCCCTAAG CGTGTACTAA GTGGAAAAGG ATGTCCGGTC GCGAAGACAA CCAGGAGGTT GGCTTAGAAG CAGCCACCCT TGAAAGAGTG CGTAATAGCT CACTGGTCTA GTGGCTGGGC GCCGACAATG TAGCGGGGCT CAAGTACACC GCCGAAGCCG CGGCACTCAC AGTTTTGACT GTGGGTGGGT AGGGGAGCGT CGTGCAGCCG TAGAAGCAGC AGGGTGACCT AGTTGTGGAG GCTGCGCGAG TGAGAATGCA GGCATGAGTA GCGAATGACA AGTGAGAAAC TTGTCCTCCG GATGACCAAG GGTTCCTGGG CTAGGTTAAT CCTCCCAGGG TGAGTCGGGA CCTAAGGCGA GGCCGACAGG CGTAGTCGAT GGACAACGGG TTGATATTCC CGTACCCGTG TCAGATCGCC CCTGATGAAT CAGTTGTACT AACCGTCCTG AAGCACCTTG ATCACCTTCG GGTGACGGTG GTGTGGATGC ACGGGACCTC GGCTGGTAGT AGTCAAGCGA TGGGGTGACG CAGGAAGGTA GTGGGGCCAG TCAGTGGTTG TACTGGTGTA AGCCTGTAGG GCGAGATCTA GGCAAATCCG GATCTCATGA TGCCTGAGAG GTGATGCGTA GCCGTTGCGG CGAATTCCAT GATCCTATGC TGCCGAGAAA AGCCTCTAGC GAGATCTGAT GTGGCCCGTA CCCCAAACCA ACACAGGTGG TCAGGTAGAG AATACCAAGG AGATCGAGAG AACTGTGGTT AAGGAACTCG GCAAAATGCC CCCGTAACTT CGGGAGAAGG GGGACCTCGT CTGGTGATGA TCTTTACGGT CGGAGCTGGG TGGGGTCGCA GAGACCAGAG AGAAGCGACT GTTTACTAAA AACACAGGTC CATGCGAAGT CGTAAGACGA TGTATATGGA CTGACGCCTG CCCGGTGCTG GAAGGTTAAG AGGACCGGTT AGCCGTAAGG CGAAGCTGAG AATTTAAGCC CCAGTAAACG GCGGTGGTAA CTATAACCAT CCTAAGGTAG CGAAATTCCT TGTCGGGTAA GTTCCGACCT GCACGAATGG CGTAACGACT TCTCTGCTGT CTCAACCACA GACTCGGCGA AATTGCAGTA CGAGTAAAGA TGCTCGTTAC GCGCGGCAGG ACGAAAAGAC CCCGGGACCT TCACTATAGC TTGGTATTGG TGTTCGGTTC GGTTTGTGTA GGATAGGTGG GAGACTGTGA AGCGGGCACG CCAGTGTTCG TGGAGTCGTT GTTGAAATAC CACTCTGATC GTATTGGATA CCTTAACCTC GGACCATGAT CTGGTTCAGG GACAGTGCCT GGTGGGTAGT TTAACTGGGG CGGTTGCCTC CCAAAATGTA ACGGAGGCGC CCAAAGGTTC CCTCAGCCTG GTTGGCAATC AGGTGTTGAG TGCAAGTGCA CAAGGGAGCT TGACTGTGAG ACTGACAGGT CGAGCAGGGA CGAAAGTCGG GACTAGTGAT CCGGCACCGG CAAGTGGAAG CGGTGTCGCT CAACGGATAA AAGGTACCCC GGGGATAACA GGCTGATCTT CCCCAAGAGT CCATATCGAC GGGATGGTTT GGCACCTCGA TGTCGGCTCG TCGCATCCTG GGGCTGGAGT AGGTCCCAAG GGTTGGGCTG TTCGCCCATT AAAGCGGCAC GCGAGCTGGG TTTAGAACGT CGTGAGACAG TTCGGTCTCT ATCCGCCGCG CGCGTTAGAA ACTTGAGGAA GGCTGTCCCT AGTACGAGAG GACCGGGACG GACGAACCTC TGGTGTGCCA GTTGTTCCAC CAGGAGCACG GCTGGTTGGC TACGTTCGGA AGGGATAACC GCTGAAAGCA TCTAAGCGGG AAGCCTGTTC CAAGATTAGG TTTCTCACCA CCTTGAGTGG GTAAGACCCC CTACAGACTA TGGGGTTGAT AGGCCAGAAC TGGAAGCGCA GTAATGCGTG CAGGTGACTG GTACTAATCG GTCGAGGACT TACCACA
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Protein sequence | |
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