Gene Tpau_4316 details

Gene Information

• Locus tag: Tpau_4316
• ID: 9158498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014159
• Strand: -
• Start bp: 69730
• End bp: 70494
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 72%
• Product: ABC transporter related protein
• Protein accession: YP_003649216
• Protein GI: 296141974

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.991603
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGGTG TCTACGGCGC GACGAAGCGC CTCGGCGACA CCACCGTGGT CGACGACGTC 
GACTTCGAGG CCCCGACAGG TGCGATCACG TACCTGTTGG GGCCGAACGG TACCGGCAAG 
TCCACGGTGA TGCGCATGGT CGCGGGACTG GTCCGTCCGG ACCGGGGCCG GATCCTCATC 
GACGGAGCGG TCGCCGGCCG GCATCGGCCG GGGTCGCTCG GTGTCGGCTT CGGGCCGTTC 
TCCCGTCATC CCGCGCACAC CGCCAGGGCG CATCTGCTCT GGCAGGCGCG CCTGACCGGG 
CTGCCCGCAT CGTCTGCCGA TGAGGCCCTC GAGCGGGTCG GCCTGCAGTC GGTCCGGGAT 
CGTCGCGTCG GCGGTTTCTC GCTGGGCATG GCACAGCGGT TGTCCATCGC GTCCGCCGTC 
CTCGGTGATC CGCCGACGGT GCTGCTCGAC GAGCCGGCCA CCGGGCTGGA CGTCGACGGC 
CTACTCTGGT TGCGCGGCCT GCTCGCCGAC CTCAGCGCGG GCGGAACCAC TGTGCTTGTC 
GCCTCGCACG ATCTGCCGGA GGTCGAGGTG ACCGCGTCCC GCATCGTCGT GCTCGGGCGC 
GGGCGGGTCC TGTGCGACGA GGCCCGCGAC GACCTGCTGG CGCGGGCCAC CGGCCCGCGG 
CCGCTGGAGT CGGTCTACCT CGACCTCACC CGCGACAGCG TCGCGTACGC GCAGTCCACC 
ACCACTCCCG CTGCGGCGGA GGATCGCACC GGAGAGACCC AGTGA 

 

Protein sequence

MIGVYGATKR LGDTTVVDDV DFEAPTGAIT YLLGPNGTGK STVMRMVAGL VRPDRGRILI 
DGAVAGRHRP GSLGVGFGPF SRHPAHTARA HLLWQARLTG LPASSADEAL ERVGLQSVRD 
RRVGGFSLGM AQRLSIASAV LGDPPTVLLD EPATGLDVDG LLWLRGLLAD LSAGGTTVLV 
ASHDLPEVEV TASRIVVLGR GRVLCDEARD DLLARATGPR PLESVYLDLT RDSVAYAQST 
TTPAAAEDRT GETQ