Gene Tpau_4230 details

Gene Information

• Locus tag: Tpau_4230
• ID: 9158418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4367898
• End bp: 4368536
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 70%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003649137
• Protein GI: 296141894

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.267918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACC GGGGGAATGT CGCCTCGCGG TACCGCGACT CGGGGGAGTC GGATGCGGTG 
TCCGGGGGTT CGCCGAGGAC CGTCCGTGAT CGCCTGCAGC AAGCCCGGGT GATCGACGAG 
CCGGACGAAC TGCTGCTCGA TCGTGCCGCG CGCGGGGACA ACGGTGCCTT CGCTGTGCTC 
TACGAACGGC ATCGGCGCCA GCTCCTGGCG ACCGCTCTGC GCACCATCCG CACTCATGCC 
GACGCCGAGG ACTGCTTGCA GGACGCGATG CTCCGGGCCT ACCAGCTCTC GCCCACCTTC 
CGCGGCGACT GCAAGGTAGC CAGTTGGATG CACCGGATCG TGGTGAACGC CTGCCTCGAC 
CGCGCTCGTC GCAACCAGAT CCGGCTCGCC CTGCCGATCC CGGACGATCT GAGCAACTTC 
GCCTCCGATG AGGGCCGCGG CGCGGAAGAT CTGGATCGGC GGCTGTCGGT GGACGCGGCG 
CTGCGGCTGC TCCCCGAGGA CCAGCGGGCG GCGGTGATCG CCGTGGATAT GCACGGGCTG 
TCGGTCTCGC AGGCGGCCGA AGTGCTGGGC GTGGCGGTCG GCACCGTCAA GAGCAGGCGT 
GCCCGGGCGC GGGCCCGCCT GGAACGCCTT CTTCTGTGA 

 

Protein sequence

MTDRGNVASR YRDSGESDAV SGGSPRTVRD RLQQARVIDE PDELLLDRAA RGDNGAFAVL 
YERHRRQLLA TALRTIRTHA DAEDCLQDAM LRAYQLSPTF RGDCKVASWM HRIVVNACLD 
RARRNQIRLA LPIPDDLSNF ASDEGRGAED LDRRLSVDAA LRLLPEDQRA AVIAVDMHGL 
SVSQAAEVLG VAVGTVKSRR ARARARLERL LL