Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4130 |
Symbol | |
ID | 9158318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4255285 |
End bp | 4255986 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003649038 |
Protein GI | 296141795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.85696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGTTC TCGACGACGT CTGGCACGCC TACGACGAGC GCACCGTGTT GCGCGGTGTC TCGGCGGAGC TGACAGAACG CCGGGTCGGG ATCATCGGTG CGAACGGTTC GGGGAAATCG ACCTTGGCGC GCACCGTGAA CGGGCTCGTC GTCCCGGACC GCGGATCCGT CCACACGCTC GGCCTGGACG TGCGCAAGCA CCGGGCCGAA GTCCGCGCGC AGGTCGGGTT CATGTTCGCC GATGCGTCGG CGCAGATCGT GATGCCCACG CCCGCAGAGG ACGTCGCGTT GTCGCTGCGG CCGCGGGGCC GGCGCCGCGG TCGGCTCGAT GCTGCGCAGA CGGCGCGGAT CCGGGAGCGG GTGGTGCAGG TTCTCACCGA GTTCGGTCTC GCCGACCACG CGGACGCACC GGCGCAGCTG CTCAGTTCGG GGCAGAAGCA GATGTTGGCC TTCGCGTCGG TGTTGGTGAC CGAGCCCAAG ATCCTGGTGT GCGACGAGCC GACCACGCTG TTGGATCTGC GGAATGTGCT CACGGTGCGA ACCCGGATCG CCGCGCTGGA ACAGCAGGTG ATCCTGTTGA CGCATCACCT GGAATTGCTC GACGATTTCG ATCGGGTGCT GGTGATGGAC GAGGGCGCGG TGGTCTTCGA CGGTGCCCCT GCCGCAGCGA TTTCCGCATA CCGGGAGCTG GCGGAACAGT GA
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Protein sequence | MIVLDDVWHA YDERTVLRGV SAELTERRVG IIGANGSGKS TLARTVNGLV VPDRGSVHTL GLDVRKHRAE VRAQVGFMFA DASAQIVMPT PAEDVALSLR PRGRRRGRLD AAQTARIRER VVQVLTEFGL ADHADAPAQL LSSGQKQMLA FASVLVTEPK ILVCDEPTTL LDLRNVLTVR TRIAALEQQV ILLTHHLELL DDFDRVLVMD EGAVVFDGAP AAAISAYREL AEQ
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