Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4122 |
Symbol | |
ID | 9158310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4247545 |
End bp | 4248372 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003649030 |
Protein GI | 296141787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGTTC GCCGTTCCGT CCAAGAATTC CTACAACGCC GGAGCCTGCT GCCCGGCGCG ATCGACGCGG CACTGTCCGG CCCCGGCCGA AGCCTGCGGG GGCTGCGGAT CGTGGTGACG GGCGCTTCGT CGGGCATAGG TCGCGAGGCC GCCATCCAGC TGGCCGAGCG CGGCGCCCAC GTGATCGCGG TGGCCCGGCG CGAGCCGGAA CTCGAGCAGC TGTGCGCGAT CACCGGTGGC GAGTACCGAG TATGCGATCT GACGGATACC GCATCGATCG ACGGCCTGCT CGCCGAGCTC GGCGACGTGG ATGTGCTGAT CAATAACGCC GGGCACTCGA TCCGCCGGTC GATCGCCGAT TCCACGGATC GGCTGCACGA TTTCCAGCGC ACCATGAACC TCAACTACTT CGCAGCCGTT CACCTCGCAT TGGGCGTGCT GCCGGGGATG ATCGAGCGCG GTCGCGGGCA GATCGTGAAC GTGTGCACCT GGGGGCTGCT GGCCAACACG TTTCCGCGAT TCTCCGCGTA CGGGGCGTCG AAGAGTGCGC TAGCGATCTT CGGGCGCAGC CTGAATGCGG AGCGGCCGCA CCCCGGTGTG CACGCCACCA ACGTGTACTT CCCGCTGGTG CGCACCGAGA TGATCGCCCC CACCGAGGAA TACGAGGCCG TCGGCGCACT GGAGCCCGAC GAGGCCGGCC GGTGGATCGT CCGCGCGGTG ACGCACCAGC CGATCGAGGT CTCCCCCGCC GCGCTGCGTG CGGTGCTGCC GGTGGTCGAC CTGCTGTCGC CGTCGGCCTC GGATCGCACC ATCTCGTCGC TTACCTGA
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Protein sequence | MSVRRSVQEF LQRRSLLPGA IDAALSGPGR SLRGLRIVVT GASSGIGREA AIQLAERGAH VIAVARREPE LEQLCAITGG EYRVCDLTDT ASIDGLLAEL GDVDVLINNA GHSIRRSIAD STDRLHDFQR TMNLNYFAAV HLALGVLPGM IERGRGQIVN VCTWGLLANT FPRFSAYGAS KSALAIFGRS LNAERPHPGV HATNVYFPLV RTEMIAPTEE YEAVGALEPD EAGRWIVRAV THQPIEVSPA ALRAVLPVVD LLSPSASDRT ISSLT
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