Gene Tpau_4120 details

Gene Information

• Locus tag: Tpau_4120
• ID: 9158308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4244849
• End bp: 4245613
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 69%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003649028
• Protein GI: 296141785

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAACG CCGTCGGCGT TCCCCAGTCC ATCCTGCTGC TCGGCGGCAC CTCGGAGATC 
GGCCTCGCCA TCGTCGAGGA GTACCTCGCC AAGGGCACCC AGCACGTGGT GCTCGCGGCG 
CTGCCGAACG ATCCCCTTCG TGAGCAGTCC GTGGCCCAGG TCAAGGCCGC CGGCGCCGCC 
ACCGTGAAGG TCGTCGATTT CGACGCCACC GCCTTCGACA CCCACGCCGC CGCCATCGAT 
GAGGCCTTCG CCGACGGTGA CATCGACGTG GCCGTCGTGG CCTTCGCCCT CGACGGCGAT 
CCCGAGGAGC TGTGGCAGAA CCAGCAGAAG GCCGCGCTGG TGGCGCAGGT GAACTTCTCG 
GGGTCGGTCT CCGTCGGCGT TCTACTCGGC CAGAAGTTCA AGGCCCAGGG CCACGGTCAG 
ATCATCGCCA TGAGCTCGGT CGCCGGTGAG CGCGTGCGCC GCAGCAACTT CGTCTACGGC 
GCCACCAAGG CCGGCTTCGA CGGCTTCTAC CTCAACCTCG GCGAGGCCCT CGAGCCCTAC 
GGCGCGTCGG TCACCGTGGT CCGTCCGGGT ATGGCGCGCA CGAGGTTCTC GGCGCACGTC 
GCCAAGGAGG CGCCGCTCAC GCTCGACAAG GAGCAGGTCG CGAAGATCGC CGTGGACGCC 
GCCATCGCCG GCAAGCCGCT GGTGTGGGCG CCCGCCCCCT TCCGGTTCGT GATGATGGGG 
CTCAAGGCCG TGCCGCGGCC GCTGTTCAAG AAGCTGCCCA TCTAG 

 

Protein sequence

MINAVGVPQS ILLLGGTSEI GLAIVEEYLA KGTQHVVLAA LPNDPLREQS VAQVKAAGAA 
TVKVVDFDAT AFDTHAAAID EAFADGDIDV AVVAFALDGD PEELWQNQQK AALVAQVNFS 
GSVSVGVLLG QKFKAQGHGQ IIAMSSVAGE RVRRSNFVYG ATKAGFDGFY LNLGEALEPY 
GASVTVVRPG MARTRFSAHV AKEAPLTLDK EQVAKIAVDA AIAGKPLVWA PAPFRFVMMG 
LKAVPRPLFK KLPI