| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4013 |
|---|
| Symbol | |
|---|
| ID | 9158195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 4139948 |
|---|
| End bp | 4141393 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003648923 |
|---|
| Protein GI | 296141680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCTC GGATCAGAAC GCAGGCCCGC ACTACGACGC CGATCGCGAT CGGGGGCGAG
GCCGCGTATC GCGAGGGCCT CGACCGCCTC CTGACCAGCT ACCGCGCGAT CGACGTGAAT
TCCCGAGTGC GACTGGCGAA GAAGACTTCG AACCTGTTCC GCGCCCGCGC CGCGACCGAC
ACCCCCGGCT TGGACGTCTC CGGCCTCGGC TCGGTGATCT CCATCGATCC GCAGGCCCGC
ACCGCCGACG TCGGCGGCGT TTGCACGTAC GAAGACTTCG TTGCTGCCAC ACTGCCTTTC
GGCCTCGCAC CGACGGTGGT GCCCCAGCTC AAGACGATCA CTCTCGGCGG TGCGGTAACC
GGTATGGGCA TCGAGTCCAG TTCCTTCCGG ACCGGCCTTC CGCACGAGGT GGTGCGGTCG
ATGGACATCC TCACCGGCGC CGGCGAGATC GTGACCGCCA CCCCGGACGG ACCGAACGCC
GACCTGTACT TCGGCTTCCC CAACTCCTAC GGCACGCTCG GCTACTCGAC GCGGCTCACC
GTGGAACTCG ACGAGGTGGG CCGGTTCGTG GAGCTGCGGC ACGTGCGCTT GCACGACCTC
CGCGAACTGC AGACCACGAT GAACGCGATC GTGGATGCGG GTGAATTCGA CGGCGAGCGC
GTGGACTATC TCGACGGAGT GGTGTTCACC CGGGACGAGG CCTACCTGAC CCTGGGTCGC
AAGACCGACG AGGACGGGCC CGTCAGCGAC TACACCGGGA TGGACATCTA CTACCGCTCA
CTCCAGCACG AGGACGGGAT CCCGCGCGAC CGGCTCACCA CCCACGACTA CCTGTGGCGC
TGGGACACCG ACTGGTTCTG GTGCTCGCGT GCGTTCGGTG CGCAGAACCC CAAGGTCCGC
AGGCTGTGGC CGAAGCACCT GTTGCGCAGC AGTTTCTACT GGAAGCTGGT GGCACTCGAC
CGGCGCTACG ATATCGGCGA TCGCCTGGCC GCCCGCAAGG GCGAGCCACC CGGCGAGCGC
GTGGTGCAGG ACGTCGAGGT GCGGATCGAG GGACTCACCG ATTTCCTCGA TTGGTTCCTC
GACGAGATCC CGATCGAACC GATCTGGCTG TGCCCCTTGC GTCTCCGCGA TCCGGCGCCC
ACCGGAGCGG ACCCGCACCG GCCGTGGCCG TTGTACCCAC TCGAACCGCA CCACACCTAT
GTGAACGTGG GCTTCTGGTC CGCAGTCCCC AAGCAACCCG GTCAGATCGA GGGTCGGGCG
AACCGGTTGA TCGAGAAGAA GGTCTCGGAA CTGGGCGGTC ACAAATCGCT CTATTCGGAG
GCGTTCTACG GGCGCGAGGA GTTCGATGCG CTCTACGGCG GTCCGGTCCT GGAACAATTG
AAGACTCGTT ACGACCCCGC GGGCAGGTTG CTGGGGCTGT ACGACAAGAC AGTCAGGAGG
CAGTGA
|
|---|
| Protein sequence | MSARIRTQAR TTTPIAIGGE AAYREGLDRL LTSYRAIDVN SRVRLAKKTS NLFRARAATD
TPGLDVSGLG SVISIDPQAR TADVGGVCTY EDFVAATLPF GLAPTVVPQL KTITLGGAVT
GMGIESSSFR TGLPHEVVRS MDILTGAGEI VTATPDGPNA DLYFGFPNSY GTLGYSTRLT
VELDEVGRFV ELRHVRLHDL RELQTTMNAI VDAGEFDGER VDYLDGVVFT RDEAYLTLGR
KTDEDGPVSD YTGMDIYYRS LQHEDGIPRD RLTTHDYLWR WDTDWFWCSR AFGAQNPKVR
RLWPKHLLRS SFYWKLVALD RRYDIGDRLA ARKGEPPGER VVQDVEVRIE GLTDFLDWFL
DEIPIEPIWL CPLRLRDPAP TGADPHRPWP LYPLEPHHTY VNVGFWSAVP KQPGQIEGRA
NRLIEKKVSE LGGHKSLYSE AFYGREEFDA LYGGPVLEQL KTRYDPAGRL LGLYDKTVRR
Q
|
|---|
| |