Gene Tpau_4010 details

Gene Information

• Locus tag: Tpau_4010
• ID: 9158192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4137728
• End bp: 4138492
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 70%
• Product: cell wall hydrolase/autolysin
• Protein accession: YP_003648920
• Protein GI: 296141677

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.864975
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGACCC GTTTCGCCCT GCTGGCTGCG AGCCTCGTCC CGGCCATGAT CCTCACCGGT 
TGCTCCAGCC TATCGCCCTC GGAGCCGGCC CTGGTGAACA ACGCGGCGCC GGCCGCGGGC 
TCGCTTGCGG GCAAGAAGGT GTTCATCGAC CCGGGTCACA ACGGCAGCAA CGACGCGTCG 
ATCGGCAAGC AGGTGCCCAC CGGCCGCGGC GGCACCAAGG AATGCCAGAC CACCGGCACC 
ACGGGAGTCA ACGGCCTCGC GGAGCACACG TTCAACTACG CCGTGGCGTA CCAGGTGTAC 
CAACTCCTCA AGGCGGCGGG CGCGCAGGTA CTCATGTCGC GCAACGACGA CACCTCGGTG 
GGGCCGTGCG TCGACGCCCG CGCGAACGCA GCGAACCAGT TCGGGGCCGA CGCCGCGGTC 
TCGATCCACG CCGACGGTTC CGCCGCTGGT AACCGAGGGT TTCACGTGAA TCTTTCCTCG 
CCGCCGCTCA ACCCTGCCCA GCAGGCGTCG ACCGGATACG CGCAGGTCAT GCGGGATGCG 
CTCGTGGGCG GCGGGTTCAC CCCGGCCACC TACCTGGGCT CGGGCGGGTT GTACCCGCGC 
TCCGATCTGG CGGGCCTGAA CCTCGCCACG GTGCCCTCGA TCATGGTGGA ATCCGGCAAC 
CTCAAGGACC CCACCGAGGC GGCGATGCTC GCCTCCGCCG ACGGGCAGCA GCGGCTCGCC 
CAGGCCATCG CCACGGGCGT CGCGAACTAC CTCGGTTCCC GCTAG 

 

Protein sequence

MKTRFALLAA SLVPAMILTG CSSLSPSEPA LVNNAAPAAG SLAGKKVFID PGHNGSNDAS 
IGKQVPTGRG GTKECQTTGT TGVNGLAEHT FNYAVAYQVY QLLKAAGAQV LMSRNDDTSV 
GPCVDARANA ANQFGADAAV SIHADGSAAG NRGFHVNLSS PPLNPAQQAS TGYAQVMRDA 
LVGGGFTPAT YLGSGGLYPR SDLAGLNLAT VPSIMVESGN LKDPTEAAML ASADGQQRLA 
QAIATGVANY LGSR