Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3898 |
Symbol | |
ID | 9158079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4016784 |
End bp | 4017623 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | major capsid protein HK97 |
Protein accession | YP_003648809 |
Protein GI | 296141566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGCAA CGACCGATAA CAACCCGACG CTGCTGCAGG AGCAGGTGGC GTCCATTCTG GTCCAGCCGC TTGAGGCCGC TTCGGTGGTC CTGGCTTCTG GCCCGCAGAT CTTTAATACT GCTTCGCCGC TGCGTATCCC GCGCCTGAAG TCGGGGGCGA CGGTCGGCTG GGTAGGCGAG GGCGAGACCA TCCCCGAGAG CGGTGTCGCG TTCGACGAGG TGAAGCTGAT GCCGTCGGAC CGCAAGAGCC TGAAGGTGAT CACCTCGGTC ACCAATGAGC TGGTCCGGCA GTCCGTGATC GGCATCGACG CGGTGCTCAA GTCGCGGATC GTCACTGACG TGGCTTCGGC TCTCGACGAC GCTCTGCTGA ACGGTGACGG TGCGGACGGC TCGATCACCG GCCTGACGCT GCAGTCGGGT GTGCAGAACG CGGCTCTCGA CGTGACGAAC GCCGACAGCC TGCTTGACGC GATCGGGCTC GCCCACGCGG CGGAGGTCAC CCCGAACCGG TGGATGCTGA GCGGCGCGGA CTTCATTGCG CTGCGCAAGA TCAAGGACAC CTCGGGAAAG TACATCCTTG AGGCTGACCT CACGGCCGGA GCCACCTACA CCTTGTTCGG CATCCCCGTG GTGGTCACGA ACAAGCTCGC AGCCGGTACC GCGCTCCTGC TGGACATGAA CCAGGTCGCG GTTGCGCGGG ACGTCGACCC GACGGTCACC GTCGACGCGT CCGGCGACTA CTTCCGGACT GACTCGCAGG GCATCCGTGT TGTGACTCGC TACGACCTCG GTCTGCTGCA TCCGGAGGGC GTCATCCGAC TCTCGGCGAA CGGCAGCTAG
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Protein sequence | MVATTDNNPT LLQEQVASIL VQPLEAASVV LASGPQIFNT ASPLRIPRLK SGATVGWVGE GETIPESGVA FDEVKLMPSD RKSLKVITSV TNELVRQSVI GIDAVLKSRI VTDVASALDD ALLNGDGADG SITGLTLQSG VQNAALDVTN ADSLLDAIGL AHAAEVTPNR WMLSGADFIA LRKIKDTSGK YILEADLTAG ATYTLFGIPV VVTNKLAAGT ALLLDMNQVA VARDVDPTVT VDASGDYFRT DSQGIRVVTR YDLGLLHPEG VIRLSANGS
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