| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3873 |
|---|
| Symbol | |
|---|
| ID | 9158054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3994746 |
|---|
| End bp | 3996383 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003648787 |
|---|
| Protein GI | 296141544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGC AGTACATCGC GGGGTACCGC GTGGTACGTC GCCTGGGCGG CGGCGGCATG
GGCGAGGTGT TCCTGGTGGA GCACCCCCGG CTGCCTCGTC AGGATGCGCT GAAACTGCTG
CATTCGTCGG TGAGCAGCAA TCCGCAGTAC AAGGCTCGGT TCGAGCGGGA GGCCTACCTG
CTGGCCCAGC TCAACCACCG CAACATCATC CACCTCTACG ACCGCGGTGA GCACGATGGC
CGGTTGTGGA TCGCGATGGA GTACGTGGCG GGTCCGGACA CCGCGCAACT GCTGGCCGAA
CGCGGCCCCA TGCCGTTACC ACTGGCCATC GAGATCGCCG ACGGTGCCGG CGCCGGCCTC
GACTACGCGT ACCGGCACGC CAACATCACC CACCGCGACG TGAAACCCGC CAACATCCTG
GTGGCCTTCG ACGCGGACGG CCAGCCGCAG GTCAAGCTGG CGGACTTCGG TATCGCCAAG
GCCGCCGGTG AGGCGCTCGG CGTCACGTCG ACCGGCGTCA CCGTGGGGAC CATGGCCTAC
ATGTCGCCCG AGGCCTTCGA CAACCGGAAC CTCGACAATC GCGCCGACCT GTACTCGCTC
GCCTGCACGG TGTTCGAGCT CCTCACCGGC TCCCCACCGT TCCCCGGCGA TTCCACCGCC
GCCGTGATCT CCGCCCACCT GAACCAGCCG GTTCCGAAGA TCACCTCCCG AAACCCGCGA
CTCCCGGCGC ATCTGGACCT GGTGTTCCGG AAGGCGCTCG CCAAGCGCCC CGACGATCGG
TACTCCACCT GCGCCGAGTT CGTGGCCGGG TTGCGCGGCG AGATCCCGGC GATGCCCGCG
CAGGGCGGGA CCGCAGAGCA CCCGTCACCG TCGACCGGCG CGTACCCGGC CCCGCGCACC
GGCGGCCAGC CCACCGGCTC GTACGGGCCG CCCACCGGTG GTTATGCACC GCGGCACACC
GCGCCGCAGC CCGCGCCCAC GCGCGCCGAG GCGATGCCTC CGGCCACCGC GGCGCAGCCG
TATCCGGCCG AGCAGTCTCC CGACCGGTAT CCGCCCGCCG AGTATCGCGG CGACACCAAG
CCGCGCAAAC GCAGCCTCCC GATCGTCGTG GGCGCACTGG TCGTGATCGT CGCGCTGGTC
GTGGGCGGGT TCTTCCTGTT CAAGGAGACG AGCGGCGGCG GGACGTCCAG CGGGTCGCCA
CTGACCGCCA CCTCGGTTCA GTTGGTGAAT TTCCAGGGCA CGAACGATTC GTCACCCAAC
ATCAGGAACG TCCTCACCGG GGCAACACCG GCGTGGAAGA CGGACCAGTA CTTCAGCGGA
CCGCAGTTCG GCGGGCTCAA ATCGGGCGTC GGATTGCTGA TCACCCTCGA TCGCGAGGCT
TCGATCACCT CCGGCACGAT CACCTCACCC AGCGCGGGCT CGACGGTGCA GGTGCGTACG
GCGCAGTCGT CTTCAGTGAG TTCGCTCGAT CAGACCTCGA CGGTGTGGGA AGGCACCCTC
AACAGCGGTG ACACCGCCTT CGCCGCCGGT GGTTCGGACA AGACGCGCTA CGTGTTGGTC
TGGATCACCG GGCTAGCGCA GGTCGCCGGC GGCAAATGGC AGACCACCAT CGAACAGGTG
CAAGTGCGCG GGAACTAA
|
|---|
| Protein sequence | MNEQYIAGYR VVRRLGGGGM GEVFLVEHPR LPRQDALKLL HSSVSSNPQY KARFEREAYL
LAQLNHRNII HLYDRGEHDG RLWIAMEYVA GPDTAQLLAE RGPMPLPLAI EIADGAGAGL
DYAYRHANIT HRDVKPANIL VAFDADGQPQ VKLADFGIAK AAGEALGVTS TGVTVGTMAY
MSPEAFDNRN LDNRADLYSL ACTVFELLTG SPPFPGDSTA AVISAHLNQP VPKITSRNPR
LPAHLDLVFR KALAKRPDDR YSTCAEFVAG LRGEIPAMPA QGGTAEHPSP STGAYPAPRT
GGQPTGSYGP PTGGYAPRHT APQPAPTRAE AMPPATAAQP YPAEQSPDRY PPAEYRGDTK
PRKRSLPIVV GALVVIVALV VGGFFLFKET SGGGTSSGSP LTATSVQLVN FQGTNDSSPN
IRNVLTGATP AWKTDQYFSG PQFGGLKSGV GLLITLDREA SITSGTITSP SAGSTVQVRT
AQSSSVSSLD QTSTVWEGTL NSGDTAFAAG GSDKTRYVLV WITGLAQVAG GKWQTTIEQV
QVRGN
|
|---|
| |