| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3840 |
|---|
| Symbol | |
|---|
| ID | 9158020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3963936 |
|---|
| End bp | 3964988 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003648754 |
|---|
| Protein GI | 296141511 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG AGCTCGAAGA CCTGGCCGCC GCGGTACGGA GCGTCCTGGA CCGCCGGTGG
TCCGACGCCG CACTACGCAC CGCGATCGAC ACGCCCGCGG GCTACGACAC CGGCCTGTGG
TCGGTGCTGA GCGACCAGGT GGGCGTGGCG GCGCTCGCCG TGCCCGAGGC GGCCGGCGGG
ATGGGAGCCG GCGTCCGAGC CCTCCAGAGC GTGGCCGAAG AACTCGGGCG GCGGCTGGTC
CCATCGCCGT TCCTCGGCTC GGCGGTTCTC GCTACCTCGG TGCTGAACGG GACCGGCGCG
TGCGATCTAC TCGGTGACCT GGCATCCGGC ACGCGTACGG CAACGGTCGC CTTCGCTGGG
CGCGCCTTCA CCGACCGCCC TCTGATCATG TCCGGTGGGC GTGTTTCGGG TACCGCCTGT
TTCGTGCTCG ATGGCGACAC CGCGGATGAC CTCCTCCTCG CGGCGCGAGA CGGTGGCCGG
CTCGTCCTGC TACGCGCCGA CCGCGGCGTG GCACACCGCC GGCACACGCC GACCTTGGAC
CCGACTCGGC GGCTCGCCGA GGTCACCGTC GACCGCGCGA GCGGTACCGT GCTGCTCGAC
GATGCGGAGG CAGCACTCGC GCACGCGCTC GACGTGACCT GCGCCGTCCT CGCCGCCGAG
CAGGTGGGTG CCGCCGAGCA CGCGCTGCGG TCCACCGTGG AGTACACGAG GTCGCGCGTG
CAGTTCGGCC GTGCGATCGG CTCGTTCCAA GCGCTCAAAC ACCGAATGGC GGACATGTTC
GTGCTGGTCG AGGCCGCGCG CTCGGCGGCG TACGCGGCGG GCGAGTCTCT CGACCGCGCG
GATCCGGATG CACCGCAGGC GGTCGCGACC GCGAAAGCGT ATTGCTCCGA GGCATTCCAG
GCGGTGGCAG CGGAGATGAT TCAGCTGCAC GGAGGCATCG GAATCACGTG GGAGCACGAC
GCGCACCTCT ACTTCAAACG CGCGCACGGC AGTGCCCACC TGTTCGGCGA TCCTGCGTCC
TTCCTGGCAC TACGCCCGCT GACCCACTCG TGA
|
|---|
| Protein sequence | MTSELEDLAA AVRSVLDRRW SDAALRTAID TPAGYDTGLW SVLSDQVGVA ALAVPEAAGG
MGAGVRALQS VAEELGRRLV PSPFLGSAVL ATSVLNGTGA CDLLGDLASG TRTATVAFAG
RAFTDRPLIM SGGRVSGTAC FVLDGDTADD LLLAARDGGR LVLLRADRGV AHRRHTPTLD
PTRRLAEVTV DRASGTVLLD DAEAALAHAL DVTCAVLAAE QVGAAEHALR STVEYTRSRV
QFGRAIGSFQ ALKHRMADMF VLVEAARSAA YAAGESLDRA DPDAPQAVAT AKAYCSEAFQ
AVAAEMIQLH GGIGITWEHD AHLYFKRAHG SAHLFGDPAS FLALRPLTHS
|
|---|
| |