Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3800 |
Symbol | |
ID | 9157980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3921645 |
End bp | 3922694 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | 4-hydroxy-2-oxovalerate aldolase |
Protein accession | YP_003648717 |
Protein GI | 296141474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0681558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCA TCAACGGCGA CCTCTGGAAC GACCCCGACC GGGACGTGCG CATCGTGGAC ACGTCGTTGC GTGACGGCAG CCACGCGATG GCCCACCAGT TCACCGAGCA GAACGTGCGC GACACGGTCC GCGCGCTCGA CGACGCCGGC GTCTCGCTCA TCGAGGTGAC CCACGGAGAC GGCCTCGGCG GCAGCACCTT CAACTACGGA TTCTCCCTGG TCGACGAGCG CAAGCTCATC GCCGCCGCCG TCGACGAGGC GCAGCAGGCC AAGATCGCCG TGCTCATGCT CCCGGGGCTC GGCACCGTCG AGGACATCCG CGTGGCCGCC GACCTCGGCG CCGGTGCCCT GCGCATCGCG ACGCATTGCA CCGAGGCCGA TGTGTCCATC CAGCACTTCG GTGCCGCACG GGAACTCGGG CTGGAGACGG TGGGCTTCCT CATGCTCTCG CACATGTCCG CACCCGAGGC GCTGGCGAAG CAGGCCCGCA TCATGGCCGA TGCAGGCTGC CAATGCGTCT ACGTTGTGGA TTCCGCGGGT GCGCTGATCC TCGAAGACGC CGCTGATCGC GTGGCGGCGC TGGTCGCGGA GCTGGGTGCG GATGCCCACG TGGGCTACCA CGGGCACCAG AATCTCAGCT TCGGCGTGGC GAATTCGGTT CTGGCGTACC GCGCGGGAGC GAAGCAGATC GATGGCTCAC TGCTGGCACT GGGCGCGGGA GCGGGCAATT CGCCGACCGA GGTACTCGCC GCCACGTTCG AGCGTCTCGG CGTGCGCACC GGCACTGACA AGGATGCACT CATGGCCGCC GCGGAGGACG TGGTCAAGCC GTACATCACC CGGCTGCCGG TGATGGATCG AAGCTCGATC GTGCAGGGTT ACGCCGGCGT GTACTCCAGC TTCCTGCTGC ACGCCGAGCG CGCCGCGGCT CGCTACGGGG TCCCCGCGCA CGAGATCCTC TACGAGTGCG GTCGCCGCGG ATACGTCGGC GGGCAGGAGG ACATGATCAT CGCCATCGCC GTCGAGATGT CGGCGGCGCA GACGGCGTGA
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Protein sequence | MTGINGDLWN DPDRDVRIVD TSLRDGSHAM AHQFTEQNVR DTVRALDDAG VSLIEVTHGD GLGGSTFNYG FSLVDERKLI AAAVDEAQQA KIAVLMLPGL GTVEDIRVAA DLGAGALRIA THCTEADVSI QHFGAARELG LETVGFLMLS HMSAPEALAK QARIMADAGC QCVYVVDSAG ALILEDAADR VAALVAELGA DAHVGYHGHQ NLSFGVANSV LAYRAGAKQI DGSLLALGAG AGNSPTEVLA ATFERLGVRT GTDKDALMAA AEDVVKPYIT RLPVMDRSSI VQGYAGVYSS FLLHAERAAA RYGVPAHEIL YECGRRGYVG GQEDMIIAIA VEMSAAQTA
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