Gene Tpau_3772 details

Gene Information

• Locus tag: Tpau_3772
• ID: 9157952
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3894605
• End bp: 3895183
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 71%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003648689
• Protein GI: 296141446

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAATC CGGATGCCGA TGTCAGTGCG GCGACCGCCG CCGCACTGCG TGCCGGCCGG 
GGCGACGGAA CCGCCCTCGC GGAGTTCGTC GCCCTGACCC AGCACGATGT GCGACGGTTC 
GTGGCGCTGG TCGCCGGGGC CGACGAGGCG GACGATCTGG TGCAGGAGAC CTACCTGCGC 
GCCTTCGGCT CGCTGCATCG CTTCGAGGGC CGATCCTCGG CCCGGACCTG GCTCACCAGC 
ATCGCCCGAC ATGTGGTGAT CGACGCGATA CGCCACCGCA CCGCCCGCCC CAGCACACCC 
GTCGGCGACG GGACCGATCT GGATGGTCTC GCCGCCGCGC CGCATCGCGA CCTGCCCGAA 
CACGCTCGCG TCGAACTACG CGACCTGCTC GAACGGATCG ATGACGACCG CCGCGAGGCC 
CTGGTGCTGA CCCAGGTGAT CGGATTCAGC TACGCCGAAA CCGCGCAGAT CGTGGGGTGC 
GCCATCGGCA CCATCCGCTC GCGGGTGGCA CGAGCTCGCA CCGACCTCCA CACCCTGGTT 
CACGGCGAAG CCGCCGACCC GACCCGCGCC GCGGGCTGA 

 

Protein sequence

MPNPDADVSA ATAAALRAGR GDGTALAEFV ALTQHDVRRF VALVAGADEA DDLVQETYLR 
AFGSLHRFEG RSSARTWLTS IARHVVIDAI RHRTARPSTP VGDGTDLDGL AAAPHRDLPE 
HARVELRDLL ERIDDDRREA LVLTQVIGFS YAETAQIVGC AIGTIRSRVA RARTDLHTLV 
HGEAADPTRA AG