| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3739 |
|---|
| Symbol | |
|---|
| ID | 9157919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3856982 |
|---|
| End bp | 3857824 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_003648656 |
|---|
| Protein GI | 296141413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACC TGCCCCTGCC CGGATCCGGC GAGACGCCGG TGCGCGTGAT GACCATCGCC
GGCTCCGATT CCGGCGGCGC CGCGGGCCTG CAATCGGACC TGCGGACCTT TGCGCTCACC
GGGGTGCACG GCACCAGCGC CGTGACCGCC GTGACCGTGC AGAACAGCCT GGGAGTCACC
GGTTTCCACG CGATTCCGCC GGAAACGGTG GCGGGTCAGA TCCTCGCGGT GGTGGCTGAT
ATCGGGGTGA GCGGCGTGAA GACGGGGATG CTCGCGAACG CCGGCATCAT CGACGCCATC
GCCGGGACCG CCGCCGATGT GGGTATCGGC GAGCACATCC CGTTCCTCGT GGACCCGGTG
TGTGCCTCGC AGCACGGCGA TCCGCTGCTC TCGCCGGAGG CGCTGGACAC ACTGCTGCGG
CGACTGTTCC CGCTGGCGTG GGTGGTCACC CCGAACCTCG ATGAGGTGCG GCTGATCACC
GGGATCGAGG TGATCGACGA TGCCACGCAG CGCGACGCCG CTCGCGCGCT GCACGATCTG
GGTCCGCGAT GGGCGCTGGT CAAGGGCGGA CATCTGCGAA CCGCGGTCAC CAGCACCGAC
GTGCTCTACG ACGGCACCGA CTTCGTGGAG TTCGAGGCCC AGCGGATCGA TACCCGCCAC
GATCACGGTG CGGGCGACAC CCTGGGCGCG GCCGCCGTAT GCGCGCTCGC GCACGGCCGA
TCCGTGCCCG AGGCGATCGC CTTCGGCAAG GAGTGGGTGA CCCGTTCGCT GGCCGCCGCG
TACCCGGTCG GTGCGGGCCA CGGCCCCGTC AATGCTTCGT GGCGGTTGCG CCCGGACGCT
TGA
|
|---|
| Protein sequence | MQHLPLPGSG ETPVRVMTIA GSDSGGAAGL QSDLRTFALT GVHGTSAVTA VTVQNSLGVT
GFHAIPPETV AGQILAVVAD IGVSGVKTGM LANAGIIDAI AGTAADVGIG EHIPFLVDPV
CASQHGDPLL SPEALDTLLR RLFPLAWVVT PNLDEVRLIT GIEVIDDATQ RDAARALHDL
GPRWALVKGG HLRTAVTSTD VLYDGTDFVE FEAQRIDTRH DHGAGDTLGA AAVCALAHGR
SVPEAIAFGK EWVTRSLAAA YPVGAGHGPV NASWRLRPDA
|
|---|
| |