Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3570 |
Symbol | |
ID | 9157749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3679213 |
End bp | 3680595 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_003648487 |
Protein GI | 296141244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.406953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGC AGGTCACCGA CCGCTCGGGC GGTAACGAAC TGGGGACGAG CCTTAAACCC CGGCACATCA CGATGATCTC GATCGCGGGC GTGATCGTCG CGGGTCTGTT CGTGGGCTCG GCGAACGCGA TCAAGCTGGC GGGCCCGGCG GTGCTGATCT CGTACACGCT CGCCGGCCTG TTGGTGATCC TGGTGATGCG GATGCTGGGC GAGATGGCGA CGGCGCAGCC GGACACGGGC TCGTTCTCCA CCTATGCGGA GCGAGCCCTC GGGCGCTGGG CGGGGTGCAG CATCGGCTGG TTGTACTGGC TGTTCTGGGT GCTGGTGATC CCGGTGGAGG CGACCGCCGC GGCGGTGATC ATGGCCAAGG TGGTGGGCGG CCCGCAATGG TCCTGGGCGC TGCTCGTGGT GGTGCTGCTC ACCGTGACGA ACCTGCTGTC GGTGGGCAAC TACGGCGAGT TCGAGTTCTG GTTCGCTCTG ATCAAGGTGC TCGCGATCGT CGCTTTCCTG GTGCTCGGCG TGCTCGCGAT CCTCGGCCTG CTGCCCGGTT CCGGTGTGTC CGGCGTGCAT CACCTGTGGG ATACCGGCGG CTTCATGCCG AACGGGGCGA GTGCGGTGAT CGCGGCGATG CTCACCACCA TGTTCACGTT CATGGGCTCG GAGATCGTGA CCATCGCCGC CGCCGAGTCG CCGGAACCGG CGAAGGGGAT CACCCGTGCG GTGAATTCCG TGGTGTGGCG GATCTGCCTG TTCTATCTGG GCTCGATCTT CGTGGTCGTG GCGCTGGTGC CGTGGAACTC GCTGGACTCG GCCACCGGCT CGTACCAGGC GGTGCTCACG GCGATGAACA TCCCGGCGGC CGCGGGGATC ATGGATGTGG TGGTGCTGGT CGCGGTCGCG TCGTGCCTCA ATAGCGCGCT CTACACCGCG TCGCGGATGC TGTACTCGCT GGCACAGCGC GGCGACGCTC CCCGCGCCGC CGGCCGGACT ACCTCTCGCG GGGTTCCAGC GGTGTCGGTG CTGGCGTCGA TGCTGCTCGG ATTCCTCGCC GTGATCGGCA ACTACGTGCT GCCGGAAAAG CTGTTCGGTT ACCTGCTCGC GACCACCGGC GCGGTGGCGT TGTTCGTCTA CCTGGTGATC GCGCTCAGCC AGATCGCCCT GCGCCGCCGG GCGACGGAAC CTTCGCCGCT GCGGATGTGG TTCTTCCCGT GGGCCACCTA CGCAGTCATC GCCTTCATCG TGTTCATCAT CGTCGCGATG ATCATCGACC CGAGCCAGCG CAGCGCGGTG GGCCTCTCGA CCGGCCTCGC GGTGTTCGTC GTCGCGGCGA GCCTGCTGCA CCAGCGCCGC ATGGAGCGAC GGTCCGCCTC GGCCTCGTCG TAA
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Protein sequence | MNTQVTDRSG GNELGTSLKP RHITMISIAG VIVAGLFVGS ANAIKLAGPA VLISYTLAGL LVILVMRMLG EMATAQPDTG SFSTYAERAL GRWAGCSIGW LYWLFWVLVI PVEATAAAVI MAKVVGGPQW SWALLVVVLL TVTNLLSVGN YGEFEFWFAL IKVLAIVAFL VLGVLAILGL LPGSGVSGVH HLWDTGGFMP NGASAVIAAM LTTMFTFMGS EIVTIAAAES PEPAKGITRA VNSVVWRICL FYLGSIFVVV ALVPWNSLDS ATGSYQAVLT AMNIPAAAGI MDVVVLVAVA SCLNSALYTA SRMLYSLAQR GDAPRAAGRT TSRGVPAVSV LASMLLGFLA VIGNYVLPEK LFGYLLATTG AVALFVYLVI ALSQIALRRR ATEPSPLRMW FFPWATYAVI AFIVFIIVAM IIDPSQRSAV GLSTGLAVFV VAASLLHQRR MERRSASASS
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