Gene Tpau_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3564 
Symbol 
ID9157743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3671962 
End bp3672651 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_003648482 
Protein GI296141239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.236943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA CCTCACCCGC CCTTCCGCCC GTGGTCGACC AGCAGGCCTG GCAGGCCGCG 
ATCGACGCAC TCCGGATCCG CGAGAAGGCC GCGACCCGGG AGCTCGACGC CATCGCAGCG
GAGCGCCGCA AACTGCCTGC CGTCGAGCTG CCGGAGTACG TGCTCACCGC CGAGGATGGC
AGCAGGGTGA CCCTCGCCGA CGTCTTCGAT GGTCACTCCC AGCTGCTCAC CTACCACCAC
ATGTGGACCG ATGGGAACGA CTGGCAGTGC CCGGGGTGCA CCGGATTCAC CTCGCAATAC
ACCCGGCTCG ACGCGCTCGA CGCCTGGGAT GCCCGGTTCG TGATCATCAC CAACGGCCCG
ATCGACGAGG CGGTCGCCTA CAAGAAGCGA GTGGGCAACC GCATGGATTG GTACTCCGCC
GCGGGCAGCA GCTTCGGTGC CGATGTGGGT GCCGCACCCG GAGAGGGCTT CGCGCTCAAC
ACCTTCCTGC GTGACGGGCA GACCGTCTAT CGGGTGTGGA ACACCGGCAG CCGCGGTACC
GAGCAACTCG GCTTCCTCTT CGGCATCCTC GACGCGCTGC CCTATGGCCG ACAGGAGCAG
TGGCAGGACG TCCCGGACGG CTGGCCGCAG GGGCCCACCT ACAGCAAGTG GGCGAGCTCG
CAGGACATCG CCCGCTGGTA CGGGGCCTGA
 
Protein sequence
MTTTSPALPP VVDQQAWQAA IDALRIREKA ATRELDAIAA ERRKLPAVEL PEYVLTAEDG 
SRVTLADVFD GHSQLLTYHH MWTDGNDWQC PGCTGFTSQY TRLDALDAWD ARFVIITNGP
IDEAVAYKKR VGNRMDWYSA AGSSFGADVG AAPGEGFALN TFLRDGQTVY RVWNTGSRGT
EQLGFLFGIL DALPYGRQEQ WQDVPDGWPQ GPTYSKWASS QDIARWYGA