| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3558 |
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| Symbol | |
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| ID | 9157737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3666077 |
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| End bp | 3667087 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003648476 |
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| Protein GI | 296141233 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.617929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCC GCAAGAGCGT CCGCGTGACA GCGATGTGCT GCGCGCTCAC CGTCGGTCTC
ACCTCGGTCG CCGCCTGCAA CCGGGACGGC GGCTCGTCGG GCGGTGACGG GGTGAAGGTC
GGCCTGATCA CCAAGACCGA CACCAATCCG TTCTTCGTGA AGATCCGTGA GGCCGCGAAG
GCGCAGGCCG ATGCGAAGGG GGCGAATCTG GTCGCCCTCG CGGGCAAGTT CGACGGGGAT
AACGAGGGCC AGGTCGCGGC GATCGAGAAC CTGGTGAGCC AGGGCGTCAA GGGCATCCTG
ATCACCCCCA ATTCGTCGAC CGGCATCCTC GCCGCGATCA AGAAGGCGCG CGATGCCGGC
GTCGTGGTCA TCGCGCTCGA CACCGCCACC GAACCCGCCG ATGCCGTGGA CGCGACCTTC
GCCACCGACA ACACCGAGGC CGGCCGCCTG CAGGGCGCGT GGGTCAAGGG GGCGCTCGCG
GGGGCCGCAC CGAAACTCCT CATGCTCGAC GGCACCGCCG GCAGCACCGT CTCCGACTTC
CGGCACAAGG GCTTCCTCCA GGGCATCGGG CTCACCGAGA ACGCCCCCGA GATCGCGGGC
ACGGAGAATA CCAACGGCGA TCAGACCAAG GCGCAGACCG CGATGGAGAA CCTGCTGCAG
CGCGTCCCGG ATGCCAACGC GCTGTACACG ATCAACGAGC CGGCCGCGGC CGGCGGCTAC
CAGGCCGCGA AGAAGGCGGG CAAGGCGGCG CAGCTGACCA TCGGCTCGAT CGACGGCAGC
TGCGCCGGTG TGGACAACGT CAAGAAGGGC ATGATCGGCG CTACCGTTCT GCAGTTCCCG
GCGAAGATGG CGCAGCAGGG CGTCGACGCG GTGGTGGCCT TCGCCAAGGA TGGCACCAAG
CCGAGCGGTT TCGTCAACAC CGGCTCGCAG CTGGTGACCG ACAAGCCCGT GGCCGGAGTC
GATTCCAAGG ACACCGCGTG GGGTGCGCAG AACTGCTGGG GCCAGGCGTG A
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| Protein sequence | MPSRKSVRVT AMCCALTVGL TSVAACNRDG GSSGGDGVKV GLITKTDTNP FFVKIREAAK
AQADAKGANL VALAGKFDGD NEGQVAAIEN LVSQGVKGIL ITPNSSTGIL AAIKKARDAG
VVVIALDTAT EPADAVDATF ATDNTEAGRL QGAWVKGALA GAAPKLLMLD GTAGSTVSDF
RHKGFLQGIG LTENAPEIAG TENTNGDQTK AQTAMENLLQ RVPDANALYT INEPAAAGGY
QAAKKAGKAA QLTIGSIDGS CAGVDNVKKG MIGATVLQFP AKMAQQGVDA VVAFAKDGTK
PSGFVNTGSQ LVTDKPVAGV DSKDTAWGAQ NCWGQA
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