Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3556 |
Symbol | |
ID | 9157735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3664342 |
End bp | 3665124 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003648474 |
Protein GI | 296141231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.301945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCA CCGTGTTGCA GGCCCGTGGC CTGGTGAAGA ACTACGGACA GGTGCAGGCC ATCGCGGGCG CCGACTTCGA GCTCCGCGCG GGCGAGGTGC TGGCGGTGAT CGGCGACAAC GGCGCCGGAA AGTCCAGCCT GATCAAGGCG CTCTCGGGCG CGCTCATCCC GAGCGAGGGC GAGATCCTGC TCGACGGTGC GCCGGTGCAC TTCCGCAGTA CCCTGGACGC CCGCAACGCG GGCATCGAGA CCGTGTACCA GGATCTCGCC GTGATTCCCG CGCTCGATAT CGCCGCGAAC GTGTACCTGG GCAGGGAGAT CCGTAAACCA GGAGTGCTCG GCACCGTCTT GCGGCAGCTG GACCGCAAGG CCATGCGCGA GGCCGCGGCG GCGCACCTCG CGGACCTCAA GATCGGCATC ACCTCGCCCA CGCAAGCTGT CGAGACGCTC TCCGGCGGCC AGCGGCAGGG CGTCGCGGTG GTGCGCGCCG CCGCCTTCGG GAAGAAGGTG ATCATCATGG ACGAGCCGAC CGCGGCGCTG GGCGTACGCG AATCCGGGCA GGTGATCGAC CTGATCCGGG AGATCCGCGA CCGCGGCACC CCGGTGATCC TGATCAGTCA CGATATGCCG CACGTGTTCG AGGTCGCCGA CCGGATCCAC GTGCACCGGC TGGGGCGCCG CGCCGCCGTC GTGGATCCGA AGCAGCGCAG CATGTCCGAG GTGGTCGCGC TCATGACGGG CGCCCTGGAG CCGACCGATG TGGAGGCGGC GGGTGGGCCG TGA
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Protein sequence | MTATVLQARG LVKNYGQVQA IAGADFELRA GEVLAVIGDN GAGKSSLIKA LSGALIPSEG EILLDGAPVH FRSTLDARNA GIETVYQDLA VIPALDIAAN VYLGREIRKP GVLGTVLRQL DRKAMREAAA AHLADLKIGI TSPTQAVETL SGGQRQGVAV VRAAAFGKKV IIMDEPTAAL GVRESGQVID LIREIRDRGT PVILISHDMP HVFEVADRIH VHRLGRRAAV VDPKQRSMSE VVALMTGALE PTDVEAAGGP
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