Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3507 |
Symbol | |
ID | 9157682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3618890 |
End bp | 3619531 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003648425 |
Protein GI | 296141182 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.892641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCGGG TGCTGATCGT CGACGACCAG CGGTTGATCC GCGACAGCCT GCGCATGCTC TTCGACGGCG TGGACGACTT CGAGGTGGTG GGCGAGGCGC GCGACGGGCA GCAAGCCGGA GACGAGTTCG CCCGCACCCT GCCGGATCTG GTGCTGATGG ACCTGCGGAT GCCCGGCGCC GACGGGATCG TGGGGATCGA GCGGATCAAG GCGCAGGACC CGGATGCGGC CGTCGTGGTA CTCACCACCT TCGACGACGA CGATCATCTG TATCCCGCGC TGCGGGCCGG GGCCGCGGGC TTCCTCGCCA AGGACATCGC CCCCGAGGAC CTGCTGGACG CGGTGCGCCG CACCCTGGCC GGCGACGTTC CGCTCTCGCC CGCCACCGTC AAACGACTGA TCGGTCAGGC GCTGGTGGCC CGCACGGATG CGCCGGCGCC GGCCGCCGCT CCGGCCGAGT ACTCGTTGAC CGCCCGCGAG CGCGAGGTGC TCGCGCTGAT CGGGCAGGGC CTGTCGAACG CCGAGATCGC CGCCGAGCTG CACCTGGCGG TGACCACGGT GAAGTCACAC GTGACCAACC TGCTGGCGAA GACCGATTCC AGCACCAGGT TGCAGCTGGC CCTGCTCGCC GCTCACGGGT AG
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Protein sequence | MIRVLIVDDQ RLIRDSLRML FDGVDDFEVV GEARDGQQAG DEFARTLPDL VLMDLRMPGA DGIVGIERIK AQDPDAAVVV LTTFDDDDHL YPALRAGAAG FLAKDIAPED LLDAVRRTLA GDVPLSPATV KRLIGQALVA RTDAPAPAAA PAEYSLTARE REVLALIGQG LSNAEIAAEL HLAVTTVKSH VTNLLAKTDS STRLQLALLA AHG
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