| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3497 |
|---|
| Symbol | |
|---|
| ID | 9157672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3608960 |
|---|
| End bp | 3609931 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003648415 |
|---|
| Protein GI | 296141172 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTG CCTACAGTGC CTTCGCCGGT GTCGCTTCCG GCGTGGCAGC CCTCGACATC
CGTGGACTCA CCAAGGGATT CACCACGACC GGCGGCGAGC GATTCCTCGC TGTCGACGGC
ATCGACCTCA CCGTCCAGCC CGGAGAGGTG GTGGCCTTCC TCGGCCCCAA CGGCGCTGGA
AAGAGCACCA CAATCGATAT GATCCTCGGT CTGACCCGGC CCGACGCCGG TCGCGTGCAG
GTCCTCGGGC TCACGCCCGA GGACGCAGTC CGGTCCGGCC GCGTGGCCGC CGTGATGCAG
TCCGGTGGGC TGCTTCCCGC TCTCACCGTG CAAGCCACCG TCGACGTGAT CGCCTCACTG
TTCCCCGGCG CCGATTCCGA AGAAGTGATC CGCCGCGCCG GCCTCGATGA GGTGCGGCAG
CGCACGGTGT CGACGTGCTC CGGTGGCCAG CAGCAGAGCC TGCGATTCGC GCTCGCATTG
CTCTCGGACC CCGATCTGCT GATTCTCGAC GAGCCCACCG CCGGTATGGA TGTCGATGCT
CGCCGCCGGT TCTGGGCCGA TGTGCGAGCC GACGCCGCGC GGGGTACCAC GGTGCTCTTC
GCCACCCACT ACCTCGACGA GGCGGACCAC TTCGCCGATC GCGTCGTGAT GGTGGCCCGG
GGCCGTGTCG TCGCCGACGG CACCACCGCC GAGGTCCGCG CCCGTACCTC GGGGCGGGCC
GTCTCGGCGG TCGTCTCGCG CGCCGGTGCC GATGCCGCGC TGCACACCGT GCCCGGCACA
CGAATAGTCG AAATCCGAGG CGACCGTACG GTGTTCGCCA CACACCGACA CGGCTCCCCG
GGAAAGGCAT CGTCGGACGA TCTGGTGCGT TTCCTTCTCA CCCGGACCGA TGCGCGCGAA
CTCGAGGCGG TGAGCCTCGG CCTCGAAGAG GTCTTCGTTC AGCTCACCGC CGACGGAGAG
GTAGCCCGAT GA
|
|---|
| Protein sequence | MTSAYSAFAG VASGVAALDI RGLTKGFTTT GGERFLAVDG IDLTVQPGEV VAFLGPNGAG
KSTTIDMILG LTRPDAGRVQ VLGLTPEDAV RSGRVAAVMQ SGGLLPALTV QATVDVIASL
FPGADSEEVI RRAGLDEVRQ RTVSTCSGGQ QQSLRFALAL LSDPDLLILD EPTAGMDVDA
RRRFWADVRA DAARGTTVLF ATHYLDEADH FADRVVMVAR GRVVADGTTA EVRARTSGRA
VSAVVSRAGA DAALHTVPGT RIVEIRGDRT VFATHRHGSP GKASSDDLVR FLLTRTDARE
LEAVSLGLEE VFVQLTADGE VAR
|
|---|
| |