Gene Tpau_3478 details

Gene Information

• Locus tag: Tpau_3478
• ID: 9157653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3572955
• End bp: 3577676
• Gene Length: 4722 bp
• Protein Length: 1573 aa
• Translation table: 11
• GC content: 72%
• Product: Acyl transferase
• Protein accession: YP_003648398
• Protein GI: 296141155

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGC AGGAAGCCAA GCTGCGCGAC TACCTCAAGC GCACTCTCGC CGAACTGCGA 
GTGGTGCGCC GCGAACTCGC CGAGGCCACG GCGGGCGGCG GTGACGGCCG CCGGAGTGAA 
TCTGGCGATC CCATCGCGAT CGTCGGGATC GGCATCCGGT TCCCCGGCAT CCACGGACCA 
GCGCAGATGT GGTCGGCACT GGAGCGGGGC GCCGACCTGG TCGGCTCGTT CCCCACGGAC 
CGGGGATGGG ATCTCGCCGG CCTGTACCGG CCACCGGCGG GGGATGACCC GCGCTCCGGT 
GAGCGGGAGC CCGGCACCAG CTACGTGGAC GCAGGCAGCT TCCTGTCCGA TGTCGCGGAG 
TTCGACGCCG AATTCTTCGG GATCTCGCCC CGTGAGGCGC TCGCCATGGA TCCGCAGCAG 
CGGCTCCTGC TGCACACCGG TTGGGAGGCC ATCGAGCACG CGCGCATCGA CCCCACCTCC 
CTCGCCGGTG AGCGGGTCGG CGTCTACCTG GGCGCCACTG ACCACGACTA CGCGCGGGAC 
CGCGCCACCT GGCCCACCGA TATCGAGGGC AACGCGATGA TCGGCCGCTC CGGGGCTGCC 
TCCGCCGGGC GCATCTCCTA CACCCTCGGC CTCACCGGCC CGGCGATCAC CGTCGACACC 
ATGTGCTCGT CATCGCTGGT GGCGACGCAC CTCGCCGTGC GGGCACTGCG CCAGGGCGAG 
TGCACCATGG CGCTCGTGGC CGGCACCACG GTGATGTCCA CCCCCGAGGG CTTCACCGAG 
TTCAGCGCGC AGGGGGCGCT GAGCCCCAGC GGTCGCTGCC GGTCCTTCTC GGACGACGCC 
GACGGCACCG CATGGTCCGA GGGCATCGCC GCCGTCGTGC TCCAGCCTCT GAGCGAGGCC 
CAGCGGGACG GCCGCCGGGT GCTCGCGGTC ATCGAGGGCT CCGCCGTCAA CCAGGACGGT 
GCGAGCAACG GCCTCACCGC TCCGAGCGTG TCCGCGCAGC GCGATGTGAT CACCGCGGCC 
CTCCGCGACG CCGGCCTCGA CCCGGCGGAC ATCGATGCGG TCGAGGCGCA CGGAACGGGC 
ACGGTCCTCG GTGATCCGAT CGAGGCGACC GCCTTGCTCC AGACCTACGG TGCGGCACCT 
GCGCGCCGTC GCCCGCTGCT GCTGGGATCG TTCAAATCGA ATGTCGGGCA CTCGGCCGCC 
GCTGCCGGTG TCGCCGGACT CATCAAGATG ACCCTCGCAC TGACCCACGG GTCTCTGCCC 
CGCACACTGC ACGTGGACGC GCCCAGCACC AAGGTGGACT GGTCGCAGGG CGCCGTCGAA 
CTGCTCACCG CGCCCCGCCC GTGGTCCGCG ACGCCCGGGC GTCGTCGCCG CGCCGGTATC 
TCCGCCTTCG GCGCCAGCGG GACCAACGCG CACGTGATCG TCGCCGACGC CCCACCGGTC 
CCCGAGCCCA CCGGACCGGA TCCCGAGATA CTGTCGTCCA CCGGGGTCGG ACGCGGCGCT 
CTGGCGTGGC CACTGTCGGC CCGGTCCGCG GCCGCCCTCC CGGCGCAGGC GCAGGCGCTG 
CTCACCGAGG TCGATTCCGC CTTCGCCGCC GACCATCCGG ACGACGACGT CGCGCGGGAA 
CGCTATTGCG CCGATCTGGC GCTCTCGCTC GCCGGCCGCA CCCAGCACCC GCACCGCGTC 
GTGATCACCG GCGGCCCAGC ACGACTCCGC GAGCGGCTCG CCGGACTCGC CCGCTCCGAG 
GCCGTTCCCG AGCCCGGCGT GGTCGCCGTC GACACTGCGC GCGACCGCCT CGGTCCCGTT 
TTCGTCTTCC CCGGCCAGGG CGGCCAGTGG GCCGGTATGG CCGCGGGCCT GCTGCGTGAC 
TGTCCGGCGT TCGCCCACCG GTGGGAGCAG TGCGCCGAGG CGCTCGCACC GCACGTCGAT 
TTCGACCTCA GCGACACCGT CGCCGATCCG GAGGGGGCGT GGCTCGAGGA CGTGAGCCGC 
GTGCAACCGA TCCTCTGGGC GACCATGGTG TCCCTCGCCG AGGTGTGGGC GGCGGCCGGG 
GTGCGCCCGG CCGCCGTGAT CGGCCACAGC CAGGGCGAGA TCGCTGCCGC CTGCGTGATC 
GGTGCGCTCT CGCTCGCCGA CGGTGCCCGC CTGGTGGCCA CCCGCAGCCG CCTTCTGACA 
CGGCTGTCCG GTCGGGGAGG GATGCTCGCC CTCGGTGCGA ACCGGGAGGA AGCATTGCGT 
CGGCTGATCC CCGGCGTCCA GCTCGCCGCC GAGAACGGTG CCGGGTCGGT GGTGCTCGCG 
GGTGCTGCCG ACGCGTTACG ACGCTACGCC GATACCGCGG AAGCGGACGG CATCCGCACG 
CGGATGATCC CGGTGGATTA CGCCTCGCAT TCCGAGCAGG TCGACGAGAT CGCCACCGCC 
CTCACCGCCG CGACCGGTGA CATCGTCGCC CGGGACGCGC CCGACTCCGA GTTCTACTCC 
ACGGTGGCCG GCCGCACCGG CGAGCCCATC GCCACCGAGG CGCTCGGCGG CGGGTACTGG 
TTCGAGAATC TCCGGAATAC AGTCGAATTC GCGACAGCAG TGCGCCGAGC GATCACCGAC 
GGCTACGGAC TCTTCATCGA GGTCAGCCCG CATCCGCTGC TGCTCACCGC GATCGGCGAG 
ACGGCAGACA CACTCGGCGG AGCGGACGAT GTGGCGGTCG TGGGCACTCT CGCCCGCGAC 
CGGGGCGGTC TCGACCAGAT CTGGTACTCG CTGGGACAGG TGCATGCCGC CGGCGGTGCC 
GTGGACTGGG CGCGTGCGCT CGCCGCGTAC GCGCCGCGCA TCGTCGACCT ACCGACGTAC 
CGGTTCAGTA CTCGCCGGTA CTGGCTTCCG GACGGACGCG CGGCCCTGAA CCGGTACGCG 
CCCAACCCGA TCGGATCCGT CGACGAGTGG CGCTACCGCG TCGCCTACCT GCCCGTTGCG 
GCATCGACCG GATCACTGCC CGGCACCGTG ACCGTGATCA CCGATCACCA CCGCACCGGC 
GCGGCCGACG CACTGCGGGC CGCGGGTGCC GCCGTCACCA CCTGCCGGAT CGGCGAATGG 
CGAACGGATG CACCCGCTGC CGATGCATCC CTGGTGCTGC TCGGCGGCGA GGCTGAGCCC 
ACGGCCCACG GCGGCGCACA GTCGGTTCCA CCGGCGCTCG CCGAGGCCTT CGAACTGGTG 
TCCCGGCACA TCCGGGGACC CGCTCATCCG CTCTGGTTCG CCGGTGACGA AAGCGCCCCG 
GACGTCGCCG CCGCGTTCGC GCTGATCCGC GTCGCCGCTT TGGAATTCCC GAACCACATC 
GGTGGCACCG TCGATCTGCC CGACGGCGCC CTGGACGCCG ACCGACTCCT CGCGGCTCTG 
AGGGGTGAAC ACGATCAGGT CTCGCTGCGC ACGCCATCGG CCGGCGAGAT CGGGGTGCGC 
CGCCTGCTCG CCGGGCCGTT CCCCGGGAGC GGACCGCGAA CCGGTGACTG GACGCCACGC 
GGGACCGTCC TGATCACCGG CGCCACCGGT GGCATCGGTG GCCAACTCAC CCGCTGGCTG 
GCCGCCCGCG GCGCTCCACG GATGATCCTG CTCAGCCGCC GGGGTGAGGC CGCACCCGGC 
GCGGCCGACC TGGCCGACGA GCTCGCCGCC GCAGGTGCGC AGCCGCGGAT CGTGGCCGCC 
GATGCCTCCG ATACCGACGC GCTGGTCCGG ATCCGCGACG AGTACGCCGC CGCCGGAACG 
CCGATCACCT CCGTCTTCCA TCTCGCCGGT GGCGGGACCC TTGCGGATCT CATCGACACC 
GACGCGGCGG AGTTCGCAGC GACCGCGCAC GCGAAGATCG ACGGTGCCCG GGCCCTGGAC 
GCGGTGTTCC CGGATGTCGA GGACTTCGTG CTGTTCTCCT CGATCTCGGC GGTGTGGGGC 
AGTGGATCCC ACGGCGCCTA CGCCAGCGCC AACGCCTACC TCGATGCGCT CGCGCGCGGT 
AGGCGTGCCG CCGGACGAGA CGCCGTATCG ATCGTGTGGG GCATCTGGGA CCCGGCGGAC 
GGCGGAGGGA TGGCTGCGAA TCTGGTCCGT GAGCAACTGG CCGCCCGGGG GATCCCATTC 
ATGGATCCGT CCCGATCACT GCGCGAACTC GGTGCCGTTC TCGGTGGCGA CCCGCAGCCG 
GTCGAGGTGA TCGCGGCCGT CGACTGGGAA CGGTTCCTGC CGGTCTTCAC CTCTGCCCGC 
TCCAGTGGCC TCTTCGACGA GCTGCCCCGC GGCGGTGTAC CGGATGCCGG CGAATCACGT 
TCCGGCGGAG AACTGCCCGA TCTCGCGCGC AGGGTGCTCG ACCTGCCGGA TCGTGAACGC 
GATGCAGTCG TCAGCGACGT GGTCCGCGAC ACGATCGCCG CGGTGTTGCG TCTCGATCCC 
GGCGAGGTCG ATACCGAAAG GGCCTTCCGG GATGTGGGCA TCGACTCGCT GACCGCGATC 
GACACCCGCA ACCGGCTGCG CGCAGCGACC GGTATCCCGC TCCCCGTGAC CATGGTCTTC 
GACCACCCCA CGGTCACCGC GCTGGCCCGG TACATCACAG GGCGGCTGCT TGAAGGCAGC 
GAGGAGCCCA CCGCACCATC GGTCGACCGA ACGGCCCCAT CGCCAGGTCG GGGGACGTCG 
GTGGACCTCA CGACGCCGGC GGACGACCTG CTCGACGTGG ACGAGATGGA CATCGCGGAC 
CTGATCCGCG CCGCGAACGA CGCAGAGGAG GCGGCCCGAT GA 

 

Protein sequence

MSEQEAKLRD YLKRTLAELR VVRRELAEAT AGGGDGRRSE SGDPIAIVGI GIRFPGIHGP 
AQMWSALERG ADLVGSFPTD RGWDLAGLYR PPAGDDPRSG EREPGTSYVD AGSFLSDVAE 
FDAEFFGISP REALAMDPQQ RLLLHTGWEA IEHARIDPTS LAGERVGVYL GATDHDYARD 
RATWPTDIEG NAMIGRSGAA SAGRISYTLG LTGPAITVDT MCSSSLVATH LAVRALRQGE 
CTMALVAGTT VMSTPEGFTE FSAQGALSPS GRCRSFSDDA DGTAWSEGIA AVVLQPLSEA 
QRDGRRVLAV IEGSAVNQDG ASNGLTAPSV SAQRDVITAA LRDAGLDPAD IDAVEAHGTG 
TVLGDPIEAT ALLQTYGAAP ARRRPLLLGS FKSNVGHSAA AAGVAGLIKM TLALTHGSLP 
RTLHVDAPST KVDWSQGAVE LLTAPRPWSA TPGRRRRAGI SAFGASGTNA HVIVADAPPV 
PEPTGPDPEI LSSTGVGRGA LAWPLSARSA AALPAQAQAL LTEVDSAFAA DHPDDDVARE 
RYCADLALSL AGRTQHPHRV VITGGPARLR ERLAGLARSE AVPEPGVVAV DTARDRLGPV 
FVFPGQGGQW AGMAAGLLRD CPAFAHRWEQ CAEALAPHVD FDLSDTVADP EGAWLEDVSR 
VQPILWATMV SLAEVWAAAG VRPAAVIGHS QGEIAAACVI GALSLADGAR LVATRSRLLT 
RLSGRGGMLA LGANREEALR RLIPGVQLAA ENGAGSVVLA GAADALRRYA DTAEADGIRT 
RMIPVDYASH SEQVDEIATA LTAATGDIVA RDAPDSEFYS TVAGRTGEPI ATEALGGGYW 
FENLRNTVEF ATAVRRAITD GYGLFIEVSP HPLLLTAIGE TADTLGGADD VAVVGTLARD 
RGGLDQIWYS LGQVHAAGGA VDWARALAAY APRIVDLPTY RFSTRRYWLP DGRAALNRYA 
PNPIGSVDEW RYRVAYLPVA ASTGSLPGTV TVITDHHRTG AADALRAAGA AVTTCRIGEW 
RTDAPAADAS LVLLGGEAEP TAHGGAQSVP PALAEAFELV SRHIRGPAHP LWFAGDESAP 
DVAAAFALIR VAALEFPNHI GGTVDLPDGA LDADRLLAAL RGEHDQVSLR TPSAGEIGVR 
RLLAGPFPGS GPRTGDWTPR GTVLITGATG GIGGQLTRWL AARGAPRMIL LSRRGEAAPG 
AADLADELAA AGAQPRIVAA DASDTDALVR IRDEYAAAGT PITSVFHLAG GGTLADLIDT 
DAAEFAATAH AKIDGARALD AVFPDVEDFV LFSSISAVWG SGSHGAYASA NAYLDALARG 
RRAAGRDAVS IVWGIWDPAD GGGMAANLVR EQLAARGIPF MDPSRSLREL GAVLGGDPQP 
VEVIAAVDWE RFLPVFTSAR SSGLFDELPR GGVPDAGESR SGGELPDLAR RVLDLPDRER 
DAVVSDVVRD TIAAVLRLDP GEVDTERAFR DVGIDSLTAI DTRNRLRAAT GIPLPVTMVF 
DHPTVTALAR YITGRLLEGS EEPTAPSVDR TAPSPGRGTS VDLTTPADDL LDVDEMDIAD 
LIRAANDAEE AAR