Gene Tpau_3476 details

Gene Information

• Locus tag: Tpau_3476
• ID: 9157651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3556864
• End bp: 3563100
• Gene Length: 6237 bp
• Protein Length: 2078 aa
• Translation table: 11
• GC content: 71%
• Product: 6-deoxyerythronolide-B synthase
• Protein accession: YP_003648396
• Protein GI: 296141153

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.975102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAG AGAAGCTCCG CTCCTACCTG CTCAAGGTCA CCGAGGACCT GCAGAAGACC 
AAGCGCGAAC TGGACCGGAC CCGTGCGGAG GCCACCGAGC CGATCGCGAT CGTCGGTATG 
GGCTGCCGCT ACCCGGGAGG AGTGGACACC CCCGAAGGTC TCTGGCGCCT CGTTCGCGAC 
CGGGTCGACG CGGTCACCCC GTTCCCGGCC GACCGCGGCT GGGATCTCGA CGGCCTGTAC 
GACCCGGACC CGGATGCTGT GGGCACGTCG TACGCGCGGG AGGGTGGATT CCTCGCCGAT 
GTCGCCGGAT TCGACGCCCC GTTCTTCGGC ATCTCGCGGC GGGAAGCCAT CGCGATGGAC 
CCGCAGCAGC GCCTGCTGCT CGAGGTCGCA TGGGAGGCCC TCGAGCACGC GGGCATCGCA 
CCGGCCTCCC TGGCGGGCAC TTCGACCGGT GTCTTCGCCG GTGTCATGTA CCAGGACTAC 
GGTCGGCGAC TGGCGTTTCC TCCGCCTGAG GTCGAGGGCT ACCTCGGTGC AGGCGGGTCC 
GGCAGCATCG CCTCGGGGCG AATCGCGTAC GTGCTCGGAC TGGAGGGTCC CGCGGTCACG 
GTCGACACCG CGTGTTCGTC CTCGCTCGTC GCGGCCAGGC ACGCGATGAC CTCGCTCCGG 
CAAGGAGAGT CCTCGCTGGC GTTGGTCACC GGGTCCATGG TGATGTCCAC ACCGGTGGCC 
TTCGTCGACT TCGCCCGCCA ACGCGGACTC GCCGCGGACG GCCGATGCAA GGCATTCTCG 
GACGGAGCCG ATGGCACCGG TTGGGGCGAG GGGGTGGGCG TGCTCGTACT GGAACGCCTA 
TCCAGCGCCC GTCGCAACGG CCGCCGGGTG CTCGCGCTGC TGGAAGGCGC GGCCATCAAC 
CAGGACGGCG CATCGAGCGG GCTCACCGCG CCGAGCGGCC CGTCGCAACA GCGGGTGATC 
CGGGCCGCAC TGGCCGATGC GCGGATCACG GCCGACGACG TGGACGTCGT CGAAGGGCAC 
GGCACCGGCA CGAGCCTCGG TGACCCGATC GAAGCCCAGG CAGTGCTCGC CACCTACGGC 
GCCGGCCGAT CAGCGGGACT CCCGCCGCTG GTGCTGGGAT CCCTCAAGTC CAATATCGCC 
CACACCCAGG CTGCCGCTGG GGTCGGAGGC ATCATCAAAA TGGTGATGTC GCTGCAGAAT 
GCGACGATCC CGGCGACGCT GCACGCGGAT ACCGCGTCGA CGCGGGTCGA CTGGGATTCC 
GGCCGAGTCG AGCTGGCCAC TGAAGCGAGG CCGTGGCCGG CTCACCCGGA CCGGCCACGC 
CGGGCCGCTG TCTCGTCCTT CGGGTTCTCC GGCACCAATG CGCACGTGAT CGTGCGGGAG 
GCACCCACTG ACGACGCCGC GCCTCCGGCG CCCGAACCGA CTCCGGACGC GGTACCGGAG 
GTGGAACCAC CGGCGGTACC CCTGATCGTA TCGGGTAAGG GGCAACGCGC ACTGGCCGCA 
CAACTCGACA AGCTCGCGGA TTTCGTGACG GGAGAGGCGA CCTCGATTCC GCCGGACACC 
CGGGCCGCCG ATATCGCCTA CTCGTGCGCC ACCACCCGGT CGGCACTCAG TCACCGCTGG 
GCCGCCACCG TGCCGGTGGG CGCCTCGCCC GCCGTGATCG CCGAGAGGTT GCGTGCGGGC 
GCCGACGAGA TCCGTAGCGC ACCACCACGT CAGGTTCCGC CCTCCGGTCG AACGGCGTAC 
CTGTTCTCCG GGCAGGGATC GCAGGCCGTC GGTATGGGTG CCGAATTGGC ACACACCTAC 
CCGGTGTTCG CGGCCGCCGC CGAGGAGATC GGCGCCGAGA TCGCCCGCCA GACCGGAATC 
GACATCGCGG CAATCATGTT CGGTGATCCG GCGGTGTACG CCGCGGAGCT GGCGAGCACC 
CGGATCTCAC AACTGGCGCT GCTCACTCAC GAGGTCGCGA TGTACCGGCT CCTCGAGTCC 
TGGTCGCTGA CGGCCGATTA CCTGATCGGG CACTCCATCG GAGAGATCGC CGCGGCGTAC 
GTCGCCGGCG TGTTCACCCT CCCGGACGTG GTGAAGGTAG TGGCGGCGCG AGGCGAACTG 
ATGGGCAGTA CGGCGCCGGG AGTCATGGTG TCCGTCCGGG TCGACGAGCG CGAAGTCGCG 
GACGCCCTCG CCGCCGCAGC CCGTACCGGC GCCCCGGGCG TGGCGATCGC CGCCGTCAAC 
GGCCCGCGCG CCACCGTGAT CTCCGGTGCG GCGCAGGACG TTGCCGCGGT TCTCTCGCAG 
CCCGTGGCCG CGGCGTGGAA GACGAAGCGA CTCGACACCG CGCACGCCTT CCACTCGCCG 
GCCATGGAGT CGGTGGCCGA ACGGTTCGGC GAGATCCTCG CCGGAGTGAC GATGTCCGCA 
CCCCGGCGCA AGGTGATCTC CACGGTGACC GGCGCACCGG CGGCCGCGGC GGACGGAGAC 
CTGGTGACAC CGGAGTACTG GGTGTCGCAC CTGCTGGGCA GCGTGCGATT CGGTGCCGCC 
GTGACCTCCG CCCTCGACAA CGGCGTGACC CGGATGCTCG AAGTGGGGCC CGATGCCGCA 
CTCACCTCGC TCGCCCGCGC GGCGGACACC GAGCGGCCAC TGACCGCGCA CCCGACGCAG 
AAGCGGCATC AACCGCAGGC GGTACAGCTC CTCGATGCCG TCGGTGCGCT CCACGCCTCC 
GGAGCCGATG TGAACTGGGA GGCGGTCTTC GGGCCGCACC ACCCGCGGCG GGTGCCCCTG 
CCCACGTACG CATTCCAGCG CGAACGCCTG TGGCTCGAGG ACGGTGGCGC CGACCACGTC 
GGGGGTCGGG AGCGGCTGGC GCATCCGATC CTCACCTCGG CGACGGAGCA CCCGGGTAGC 
GGCGACATCA TTGTGTCGGG AAGCCTGAGC CCCACCCGTA TCCCCTGGCT ACGCGAGCAT 
GCCGTGGCAG GCACCCCCAT CCTGCCCGGT ACCGGGTTCC TCGACCTCGC CCTCAGCGCG 
GCGACGCATA TCGGTGCCGA TGTGATCGAG ACTCTGACCA TCGCTGCGCC GCTGTCGGTG 
GCCGACGAGG TGAGCATCCG GATCGTGATC GCGCCACCCG ACGCCGACGA TGCACGCCGT 
GAGGTTCGGA TCTACTCCCG CGATCCCGGG CCACTGGCGG CCGAGCCCTG GCGACTGCAC 
GCCACCGGTG TGCTCGGCGG CAGTGCCGCC CACGACGGCG ACGTGGATTC CGGGGGCGGC 
GAGGGAAAGC GGCTCGCCGT CGAAGGCATG TACCAGCGCT TCGCCGACAA CGGATTCGAC 
TACGGTCCCG CGTTCCGTGC GGTGGTGGAC GCGAGCGAAA CCACGGGCGT GGTGCACGCC 
ACCGTGCGGC TCGCGCCCGG CCTCCCGCAG GCCGGGCACG CCCTGCATCC CGTCTTCGCC 
GACGCGGCTT TGCATCCGAT CGCGCTCTCG ACCGCGCTGC TCAGCGTTAC CGACGGGCGT 
GGCCGGATGC CGTTCGAGTT CACCGGGGTA CGGCGCTACG GGCACCCGTC CGGTGCGACA 
CCGACATCGG GCCGGGTCCG GCTCGAGGCC ACCGGCCCCG ACTCCGTCGC AGTGCGCATC 
GCCGATGATC ACGGCGCGCC GGTGGTCACC ATCGAATCGC TCGTGCTGCG CGCCGCAAGC 
CCCGCGGCGA CCGGTGACGG CGCCGTCGGC GAGTTCTTCA CCGTTGCGCA ACGGCCACTT 
CCGGACGCGC CGGCCTCCGG GGCCGCTCGG ATCGGGGCGC TCGGTCCCGA TCCGGCAGGA 
ATCGGCGAAC TCCTGGACCG CTCGGGCGTG CACGTGGAGG CGTACGCCGA TATCCCGGTG 
CTCATCGACA TCCTGGGCAC CGGAGCCCTG CCGCCGCCCG CGGTGTACGC GGTGATCGAC 
CTGGCGGACC GCGGAACCGC CCGTGCGCGA CAGCTGCGCG AGCGGCTCTG CGAGACCGCT 
GACCTCCTGC GCGCCTGGGT GACCACGGAG GAACTGGCCG CCACCCCTCT GGTTCTCGTG 
ATCCCGCCGA GCGGGGACTC CGCGCTCGTC GCCGGGGTCC GCGGCCTGAT CCGCAGTGCG 
CAGAACGAGA ACCCCGGGCA GATCAGGGTG GTGACGCTCG ACAGTGTCGA ACGTCTCGGG 
GCGGCGCCCC TGCTCACCGC GCTCACCGCC GCCGAGCACC CCGAACTCAC GATCGCGGAC 
GACGGCACCG TCCGAGCGCC CGAACTGGAA CCACTGGCTG TATCCGCTAC AGGATCGTCG 
GCATGGGCCA CCCGCTGGTC GGTGGGCACC GTCGTCGTCA CCGGAGCGAA CGGTGCTCTC 
GCGACGGAAC TCGCGACGCA CCTGGTGCGC GAACATCGCG TGACATCCCT GGTCCTGTGC 
AGTCGCAGGG GCGGATCCGC ACCGGGCGCG GCTGGGGCGG CGACGACACT GAGCGAGCTC 
GGCGCATCGG TCCGGCACCT CGCCCTCGAC GTCGGCGATG CCGATGCCGT GGCCACCGCG 
CTGGGGCCAC TGGCGACGGA GATCACCGCC GTGGTGCATG CCGCCGGAGT GATCGACGAC 
GCCACCCTCG CCGGCGTGGA CGCCGACCGT CTGGACCGGG TTCTCACACC GAAAGCCGAT 
GGTGCACTGG CACTCCGATC CGTCCTACCG CATGCCGATC TCGTGTTGTT CTCCTCCGCG 
GCCGGGACGT TGGGGGGTGT GGGGCAGGGC GCGTACGCGG CGGCCAATTC GTGGCTCGAC 
GGATTCGCCG CCGATCCACC GGCGGGTGCC GGCCGCGTGA TCTCGTTGGC CTGGGGGCCG 
TGGTCGGATG ATCACGGCAC CGATCCCGAC GATGCGCCCC GCCCGAACCG ATCGGGATTG 
CGGGCGTACA CGGTGCCCGG CGGCCTCGCC GCGTTCGACG GTGCGCTCTC CCATGTGCAC 
GGCACCGGAC AGGGCGGCGC TCTCGTCCTG CTGCGGGTGG ACCGGGCCGG CCTGCGGGCG 
AACAGCGGGT CTGCGGTGCC GCTGCTCGCC CGGATGGTCC CGCAGCGTCG CCGCACCGTG 
CCCCGTAGCC ACGAGGCCGC GGCGGCCGAG AAGAAGCGTC CGAGCGACGT GCTGCACCGC 
GAGCTCGCGG TCGTGCTCGG TTTCGCACCC GACGCGGAGG TCGAAGCGGG CGCGGCGCTG 
TCCGACCTCG GATTCGACTC GCTCACCGCC GTCGACCTCC GGAACCGGCT CACCCGCGAG 
CTCGGCGTGC GCCTGCCGGC GACCTTGGTG TTCGACCACG AGACCATCGA CGACCTCGGT 
ACGTATCTGG ACGGACTGAT CGACGATACG AGCACGAGCG GCACATCGCC GGCGACCACG 
AGCGGTGAGG ACGTCGCCGC CGAGCCCGGA GGCGGCCTGC TGCTGCCGAT CTACAACCAG 
GTGTTCACCT CGGGTAAGTG GACGGAGACC TTCGCGTTCC TCCGCTCGGC GGCGGCCCTG 
CGCCCCGAGT TCAGCGGCCC CGCGGACATC GCGGAGGGAC TACCCCGCAT CGCGACCCTG 
GCGCCCGCGG TAGCCGGTGC CGCCCACCTG TACTGCCTGC CGTCGTGCAT CGCCATGGGC 
GGGATCCACC AGTACGCGCG GATCGCATCG GCCTTGCGCG GGAAGCGGGG GGTCTCCGCC 
GTAGGCATTC CCGGATTCGG TGTAGGAGAA TCGATCCCCG CCAGCATTGA CGCTGTCGTG 
GCCGTGCAGG GCGAGGCCAT CGCCGCGCAC GCGCAGGCCG TCGGTTCCGA TCCGGTGCTG 
CTCGGCTCGT CGGCGGGGGG CTGGTTCGCA GCGGCGGTCG CGGCCTATCT GGAGAACACC 
GCCCGGACCG TGGCCGGCGT CGTGCTCGTC GACACCTACC TGCCGCAGAG CAACCTGGTC 
GACCAGTTCG GCCTGGCACT GATGGACGGT ATGGCCGAAC GCGAAGGCAC GTTCGTCACA 
CTCACCGACG AGCGTCTCTC CGCGATGGGC TGGTACCTGG ACATGTGGAA GCACTGGCAG 
CCCGATAGCC TCTCGACGCC GACCCTGCTT GCCCGGGCGA CCGAACCGCT CTCCGCTGGG 
CTCGCCGAAC TCGGCACCGA CTGGCGCGCG AGTTGGCCGC ACCGTCATCA CGCGATCGAC 
ATTCGCGGCA ATCATTTCTC GATGCTCGAA CAACACTCCG CCGACAGTGC TGCGGCCATC 
GACGAATGGA TCAGCAGCGC GGTCGACGCC GACCGGAAAG GCAGGGTGCT CTCGTGA 

 

Protein sequence

MSEEKLRSYL LKVTEDLQKT KRELDRTRAE ATEPIAIVGM GCRYPGGVDT PEGLWRLVRD 
RVDAVTPFPA DRGWDLDGLY DPDPDAVGTS YAREGGFLAD VAGFDAPFFG ISRREAIAMD 
PQQRLLLEVA WEALEHAGIA PASLAGTSTG VFAGVMYQDY GRRLAFPPPE VEGYLGAGGS 
GSIASGRIAY VLGLEGPAVT VDTACSSSLV AARHAMTSLR QGESSLALVT GSMVMSTPVA 
FVDFARQRGL AADGRCKAFS DGADGTGWGE GVGVLVLERL SSARRNGRRV LALLEGAAIN 
QDGASSGLTA PSGPSQQRVI RAALADARIT ADDVDVVEGH GTGTSLGDPI EAQAVLATYG 
AGRSAGLPPL VLGSLKSNIA HTQAAAGVGG IIKMVMSLQN ATIPATLHAD TASTRVDWDS 
GRVELATEAR PWPAHPDRPR RAAVSSFGFS GTNAHVIVRE APTDDAAPPA PEPTPDAVPE 
VEPPAVPLIV SGKGQRALAA QLDKLADFVT GEATSIPPDT RAADIAYSCA TTRSALSHRW 
AATVPVGASP AVIAERLRAG ADEIRSAPPR QVPPSGRTAY LFSGQGSQAV GMGAELAHTY 
PVFAAAAEEI GAEIARQTGI DIAAIMFGDP AVYAAELAST RISQLALLTH EVAMYRLLES 
WSLTADYLIG HSIGEIAAAY VAGVFTLPDV VKVVAARGEL MGSTAPGVMV SVRVDEREVA 
DALAAAARTG APGVAIAAVN GPRATVISGA AQDVAAVLSQ PVAAAWKTKR LDTAHAFHSP 
AMESVAERFG EILAGVTMSA PRRKVISTVT GAPAAAADGD LVTPEYWVSH LLGSVRFGAA 
VTSALDNGVT RMLEVGPDAA LTSLARAADT ERPLTAHPTQ KRHQPQAVQL LDAVGALHAS 
GADVNWEAVF GPHHPRRVPL PTYAFQRERL WLEDGGADHV GGRERLAHPI LTSATEHPGS 
GDIIVSGSLS PTRIPWLREH AVAGTPILPG TGFLDLALSA ATHIGADVIE TLTIAAPLSV 
ADEVSIRIVI APPDADDARR EVRIYSRDPG PLAAEPWRLH ATGVLGGSAA HDGDVDSGGG 
EGKRLAVEGM YQRFADNGFD YGPAFRAVVD ASETTGVVHA TVRLAPGLPQ AGHALHPVFA 
DAALHPIALS TALLSVTDGR GRMPFEFTGV RRYGHPSGAT PTSGRVRLEA TGPDSVAVRI 
ADDHGAPVVT IESLVLRAAS PAATGDGAVG EFFTVAQRPL PDAPASGAAR IGALGPDPAG 
IGELLDRSGV HVEAYADIPV LIDILGTGAL PPPAVYAVID LADRGTARAR QLRERLCETA 
DLLRAWVTTE ELAATPLVLV IPPSGDSALV AGVRGLIRSA QNENPGQIRV VTLDSVERLG 
AAPLLTALTA AEHPELTIAD DGTVRAPELE PLAVSATGSS AWATRWSVGT VVVTGANGAL 
ATELATHLVR EHRVTSLVLC SRRGGSAPGA AGAATTLSEL GASVRHLALD VGDADAVATA 
LGPLATEITA VVHAAGVIDD ATLAGVDADR LDRVLTPKAD GALALRSVLP HADLVLFSSA 
AGTLGGVGQG AYAAANSWLD GFAADPPAGA GRVISLAWGP WSDDHGTDPD DAPRPNRSGL 
RAYTVPGGLA AFDGALSHVH GTGQGGALVL LRVDRAGLRA NSGSAVPLLA RMVPQRRRTV 
PRSHEAAAAE KKRPSDVLHR ELAVVLGFAP DAEVEAGAAL SDLGFDSLTA VDLRNRLTRE 
LGVRLPATLV FDHETIDDLG TYLDGLIDDT STSGTSPATT SGEDVAAEPG GGLLLPIYNQ 
VFTSGKWTET FAFLRSAAAL RPEFSGPADI AEGLPRIATL APAVAGAAHL YCLPSCIAMG 
GIHQYARIAS ALRGKRGVSA VGIPGFGVGE SIPASIDAVV AVQGEAIAAH AQAVGSDPVL 
LGSSAGGWFA AAVAAYLENT ARTVAGVVLV DTYLPQSNLV DQFGLALMDG MAEREGTFVT 
LTDERLSAMG WYLDMWKHWQ PDSLSTPTLL ARATEPLSAG LAELGTDWRA SWPHRHHAID 
IRGNHFSMLE QHSADSAAAI DEWISSAVDA DRKGRVLS