Gene Tpau_3393 details

Gene Information

• Locus tag: Tpau_3393
• ID: 9157568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3485197
• End bp: 3485961
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 68%
• Product: transcriptional regulator, MerR family
• Protein accession: YP_003648316
• Protein GI: 296141073

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.988274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGACG GGAAGCAGCA ATTCCACACG GTGGGCGCGA TCGCGCGCCT GACCGGAGTG 
AGTGTTCGCA CGCTGCATCA CTACGACGAC ATCGGGCTGG TGCCGCCCTC GGGGCGCACC 
GGCGCGGGAT ACCGCGTGTA CTCCGATGCC GATGTCGAGC GTCTGCACCG GGTACTGACG 
TACCGGGAGT TGGGCTTCCC CCTCGAGCAG ATAGCGACCC TGCTCGACGA TCCGTCCGCC 
GATGCGATGG CGCACCTGGA GGAGCAGCGC AAGCTGCTCT CCGAGCGGAT CGACCGTTTG 
CACCGGATGG TCGCGGCTGT GGAGGAGATG ATGAACAGGA AGAGGGGCGG AATCACGCTC 
AGCGCTGAGG ACCAGGCCGA GATCTTCGGT CACGACTGGC TCGGCGAGGG CTACGCCGAG 
GAGGCGGAGC AGCGCTGGGG CGACACCGAC GCCTGGAAGC AGAGCGCCGA GCGCACCGCG 
AAGCTGAGTA AGGACGACTG GAAGCGGCTC AAGGCCGAGG GTGATGCCCT GGAGGCGGCA 
CTGGCCGACG CGCTTGCGCG CGGCGTCGTC CCGGGCTCGC CGGAGGCGAA CGCGCTGGCC 
GAGCGACACC GCGAGGGCAT CAATCGCTGG TACGACTGCG ATCACGCCAT GCACGTGTGC 
GTGGCGCGGA TGTACGTCGA CGATCCGCGG TTCCGTCAGC ACTACGAGGA TGTCGCGCCG 
GGGCTGGCCC GGTACGTCTA CGACCTCGTC GTCGCGAACG AGTAG 

 

Protein sequence

MNDGKQQFHT VGAIARLTGV SVRTLHHYDD IGLVPPSGRT GAGYRVYSDA DVERLHRVLT 
YRELGFPLEQ IATLLDDPSA DAMAHLEEQR KLLSERIDRL HRMVAAVEEM MNRKRGGITL 
SAEDQAEIFG HDWLGEGYAE EAEQRWGDTD AWKQSAERTA KLSKDDWKRL KAEGDALEAA 
LADALARGVV PGSPEANALA ERHREGINRW YDCDHAMHVC VARMYVDDPR FRQHYEDVAP 
GLARYVYDLV VANE