Gene Tpau_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3348 
Symbol 
ID9157522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3447910 
End bp3449943 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content70% 
IMG OID 
Productiron permease FTR1 
Protein accessionYP_003648271 
Protein GI296141028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGG GTGATGCCGT CCCGAACTTC CTGATCGGCC TGCGAGAGGG TCTGGAAGCG 
GGACTGATCG TGAGCATCCT GCTGGCCGCC GTGAAGAAGT CGGGTGGTTC GCGGGTGCCG
GTGTGGTTGG GTGCGCTGGG CGCGGCCTCG TTGTCGGTGA GTTTCGGCGC GGTGCTGACC
TTCACCACGT CCGAGATGTC CGCGACCGCG CGCGAGGTCG TCGCAGGCAC ACTCAGCGTG
GTCGCGGTGA TCCTGGTGAC GATCATGATC TTCTGGATGC GGCGCACTGC GGCCACCCTG
TCGAAGGGGT TGCGTGGCGA TGTCGAGGCC GCGATGGCGC TCGGCGCGGG CGCCCTGGTG
CTCACCGCGT TCTTCGCCGT GGCCCGCGAG GGCCTGGAGA CCACGCTGTT CCTGTGGACC
GCGGCCCGTG CCTCGGGCGA CGCCGTGGGC CCGGCCGTCG GCGCCACGCT CGGCCTGCTC
GTCGCCTTCG GGCTGTGCGT TCTGCTCTAC CGGCAGGCGG TCCGTCTCGA CCTGGGGAAG
TTCTTCGGGT ACACCGCGGT CCTGCTCATC GTGGTGGCCG CGGGTGTGCT CTCCTACGGC
CTGGGCGACC TGCAGAACGC GGGGGTACTG CCGGGACGCA CCTGGATCGC CTTCGATCTG
ACGGGCACCG TCAACCCCGA CGCCTGGTGG GTGGCGTTGC TGTCCGGGAT CACCAATCTC
GCGCCGAAGA TGACGGTGCT CCAGGTGTTC GCCTGGCTCG CCTACCTGGT GGTCGTGCTG
TGGGCCTTCC TGCGGACCAC ACCCGCGCCG CCCGACGCGC ATCGCAAGAG TCGGTTCGAG
ACCTGGGCCG AGAGCCTCGC GGGCCGGCAG GTGTGGCCGG TGGCCGCGGT CATCGTGGTG
GTGCCGCTCC TGGTGGCCGG TCTGATCATC GCCGTCCTGC CGTCGAAACC GGCCGTCGCC
GAGTCGGTGA CGGTGACCGC CGAGGACTGC GCCCGCGAGT TCAGCGGCGC GGGCCCGGGT
CTGCAGCGGA TCTCGGTGAC CAATAAGTCG GGGAAGTCGG GCGAGATCAA CCTCGTCGAC
GGCGGGGGAG CCGTGGTCGG CGAGATCGAG ACCATCGGCC CGGCTACCAC CGCCGACCTG
TCCGCGACAT TGGGCAACGG CACGTACCAG TTCGTCTGCT ACCTCGCGGG CCAGCAACCC
ACCCGGTCGG CCCAATTCAC CGTGACCGGC GGCACGGGCG AGGCGCCCCG GGCCGTCGAC
CGGGTGACCA AGGCTGATCT GGAGGGAGTG AACGCGAAGT ACCAGGACTA TGTGCTCGAG
GTCCTCCCCG CGGTCGAGGC GGCGCTCGGC CGCGTCCGGT CCGCGTTGGC CGCCGGCGAT
GTCGACGGTG CGAAACGGGC CTGGCTCGAC ACCATGACCG CATGGGAGCG GGTCGGCGCC
TCGTACAACA GCTTCGGTGC TGCCGGGACC GCTGTCGCGG GTCTGCCCGA CGGGTTCGCC
GGCGGGGTTC GCGATCCGGA GTTCTCCGGT ATCCGGCGCA TCGAGTACGG GCTCTACCGC
GGTGAGACCC CCGCGGGCGT GATCGCACAG GTCGACAAGA CCTCGGAGGG GCTGCAGAAG
ATCCGTGCCG ATCTGCGCAC CGACGACATC GCGGGCGATC CGGTGACGCT CACCAAGCGT
GCACAGGAGA TCCTGGAGGA CGCGTTGCGC GACCACCTCA CCGGAGTGAG CGATCAGGGT
GCGCACGCGG GCTACGCTGC CACCGCCGCG AACGTCGACG CCACCCGTGC AGTGCTGCGG
ATCGTCGAGC CGCTGCTGGT GACGCGCGCC CCCGACCTGG TGCCCACCGC ACGCCGTGAG
CTCGACGAGG TGACCCGGGC CCTGGACGCG GTGAAGCGCC CGGACGGGAC CTACCCGCCC
ATCGACGCCC CGCCGCTCGC CCTGCGACAG AAGATCAACG GCACCGTCGG CCAGGCGTTG
GAGACGCTCT CGGCCGTGCC CAACCTCCTG GAGATGCCCA AGCATGAGCG ATGA
 
Protein sequence
MNWGDAVPNF LIGLREGLEA GLIVSILLAA VKKSGGSRVP VWLGALGAAS LSVSFGAVLT 
FTTSEMSATA REVVAGTLSV VAVILVTIMI FWMRRTAATL SKGLRGDVEA AMALGAGALV
LTAFFAVARE GLETTLFLWT AARASGDAVG PAVGATLGLL VAFGLCVLLY RQAVRLDLGK
FFGYTAVLLI VVAAGVLSYG LGDLQNAGVL PGRTWIAFDL TGTVNPDAWW VALLSGITNL
APKMTVLQVF AWLAYLVVVL WAFLRTTPAP PDAHRKSRFE TWAESLAGRQ VWPVAAVIVV
VPLLVAGLII AVLPSKPAVA ESVTVTAEDC AREFSGAGPG LQRISVTNKS GKSGEINLVD
GGGAVVGEIE TIGPATTADL SATLGNGTYQ FVCYLAGQQP TRSAQFTVTG GTGEAPRAVD
RVTKADLEGV NAKYQDYVLE VLPAVEAALG RVRSALAAGD VDGAKRAWLD TMTAWERVGA
SYNSFGAAGT AVAGLPDGFA GGVRDPEFSG IRRIEYGLYR GETPAGVIAQ VDKTSEGLQK
IRADLRTDDI AGDPVTLTKR AQEILEDALR DHLTGVSDQG AHAGYAATAA NVDATRAVLR
IVEPLLVTRA PDLVPTARRE LDEVTRALDA VKRPDGTYPP IDAPPLALRQ KINGTVGQAL
ETLSAVPNLL EMPKHER