Gene Tpau_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3323 
Symbol 
ID9157497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3418411 
End bp3419133 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID 
ProductMgtC/SapB transporter 
Protein accessionYP_003648247 
Protein GI296141004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTCA CCACCAACGT CGACTCGATC GACATCCTGC TCCGGATTCT CGCGAGCCTC 
GCCTGCGGTA CAGCCATCGG CATCGAACGG CAGTACCGCG CCCGCATGGC GGGCCTGCGC 
ACCAATGCGC TTGTCTCCGT GGGCTCCGCC CTGTTCGTCG TGCTCTCCGC CTACGGGTTC 
GCGGGCGGTG ATCCCACCCG TGTGGCGGCC CAGATCGTCT CGGGCATCGG CTTCCTCGGC 
GGTGGTGTGA TCCTGCGCGA CGGACTCACC GTGCGCGGCC TCAACACCGC CGCCACGCTC 
TGGTGCTCGG CGGCCGTCGG CGCCCTGTGC GGTGCGGGAC TATTCCTCCC CGCCGTCATG 
GGCACCGTCG TAGTGATCGT GGTCAACACC GCACTGCGCA CCGTCGGCCA CGCCGTCGAT 
CGGGCCCCGG ACACCGGCAA GGAGGCGCCG AGCAGATACG AGTTCGTCGC GGTCACGCGC 
GACGAGAACG AGTCGCATGT GCGGGTCCTG TTGGTGCAGG CCCTTACTCG CACCGCCTTC 
CACCTGCAAT CGATCAGCAG CACCAACATC GAGGACGGTC AGGTCGAGGT GCGCGCAACG 
CTCACCGCCG ACGGCCGTGA CGATCGCGCA CTGGAATCCG CGATCAGCCA GCTGAGCATG 
GAGCCCTCGG TCACCGCGGT GCGCTGGGAC GTCCTGCCGG AGCCACAGGA GGCCGATCTG 
TGA
 
Protein sequence
MHVTTNVDSI DILLRILASL ACGTAIGIER QYRARMAGLR TNALVSVGSA LFVVLSAYGF 
AGGDPTRVAA QIVSGIGFLG GGVILRDGLT VRGLNTAATL WCSAAVGALC GAGLFLPAVM 
GTVVVIVVNT ALRTVGHAVD RAPDTGKEAP SRYEFVAVTR DENESHVRVL LVQALTRTAF 
HLQSISSTNI EDGQVEVRAT LTADGRDDRA LESAISQLSM EPSVTAVRWD VLPEPQEADL