Gene Tpau_3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3183 
Symbol 
ID9157355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3288415 
End bp3289077 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648109 
Protein GI296140866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCG CGAAGCCGCG CAAGCGAATG ACGGCCGCGG AGCGCCGCAG TCAGCTGGTG 
GACACCGCCC GTTCGGTATT CGCCGACCGC GGCTATGCGG CCGCCACGAT CGAGGAGGTC 
GCCGCGAAGG CGGAGGTCTC GAAGCCCGTG GTGTACGAGC ACTTCGGCGG CAAAGAGGGG 
CTGTACGCGG TGGTCGTCGA TCGCGAGATG GAGATGGTTC TCGAGGTGTT CTCCCGCGCC 
ATGCTCGAGG ATCGGTCGAA GTCACGGATC GAGCAGATCG CGCTGGCGCT GCTCACCTAC 
GTCGAGGAAC GTTCGGATGG TTTCCGCATC CTCACCCGCA ACAGCTCCGT CGAGCATGCG 
GGCGGCTACT CGACTCTGCT GAACGACCTG GTGAGCCAGG TGGAGGTGAA CCTCGAGGGC 
GAGTTCGTCG AGCGCGGATT CGACCGCGAG TTGGCGCCGC TGTACGCGCA GGCGCTCGTG 
GGGATGGTCG CGATGACGGC CCAGTGGTGG CTGGAGGTGC GCCATCCTCC GAAGGAGGTG 
GTGGCAGCGC ACATCGTGAA TCTGTCCTGG TACGGCCTGG CGGGGTTGAA GGACAACCCG 
GTGGCGATCG AGCTGAGCCC GCTGGCCCCG ATCGCCGACG CGGATGTCAG CGCTGGTCGC 
TGA
 
Protein sequence
MTTAKPRKRM TAAERRSQLV DTARSVFADR GYAAATIEEV AAKAEVSKPV VYEHFGGKEG 
LYAVVVDREM EMVLEVFSRA MLEDRSKSRI EQIALALLTY VEERSDGFRI LTRNSSVEHA 
GGYSTLLNDL VSQVEVNLEG EFVERGFDRE LAPLYAQALV GMVAMTAQWW LEVRHPPKEV 
VAAHIVNLSW YGLAGLKDNP VAIELSPLAP IADADVSAGR